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minfiData

This is the development version of minfiData; for the stable release version, see minfiData.

Example data for the Illumina Methylation 450k array


Bioconductor version: Development (3.20)

Data from 6 samples across 2 groups from 450k methylation arrays.

Author: Kasper Daniel Hansen, Martin Aryee, Winston Timp

Maintainer: Kasper Daniel Hansen <kasperdanielhansen at gmail.com>

Citation (from within R, enter citation("minfiData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("minfiData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData
Version 0.51.0
License Artistic-2.0
Depends R (>= 3.5.0), minfi(>= 1.21.2), IlluminaHumanMethylation450kmanifest, IlluminaHumanMethylation450kanno.ilmn12.hg19
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me methylationArrayAnalysis
Imports Me
Suggests Me bigmelon, conumee, ENmix, funtooNorm, Harman, mCSEA, MEAL, MethylAid, minfi, missMethyl, MultiDataSet, recountmethylation, regionalpcs, shinyepico, shinyMethyl, skewr, MethylAidData
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package minfiData_0.51.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/minfiData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/minfiData
Package Short Url https://bioconductor.org/packages/minfiData/
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