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CopyNeutralIMA

This is the development version of CopyNeutralIMA; for the stable release version, see CopyNeutralIMA.

Copy Neutral Illumina Methylation Arrays


Bioconductor version: Development (3.20)

Provides a set of genomic copy neutral samples hybridized using Illumina Methylation arrays (450k and EPIC).

Author: Xavier Pastor Hostench [aut, cre], Moritz Przybilla [aut]

Maintainer: Xavier Pastor Hostench <xavier.pastor at compbio-dev.com>

Citation (from within R, enter citation("CopyNeutralIMA")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("CopyNeutralIMA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CopyNeutralIMA")
CopyNeutralIMA HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, GEO, Homo_sapiens_Data, MethylationArrayData, MicroarrayData, TwoChannelData
Version 1.23.0
License Artistic-2.0
Depends R (>= 3.5.0)
Imports ExperimentHub, Rdpack (>= 0.8)
System Requirements
URL
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Suggests BiocStyle, knitr, rmarkdown, minfi, conumee, minfiData
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Depends On Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package CopyNeutralIMA_1.23.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/CopyNeutralIMA
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/CopyNeutralIMA
Package Short Url https://bioconductor.org/packages/CopyNeutralIMA/
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