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ExperimentHubData

Add resources to ExperimentHub


Bioconductor version: Release (3.19)

Functions to add metadata to ExperimentHub db and resource files to AWS S3 buckets.

Author: Bioconductor Maintainer [cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("ExperimentHubData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ExperimentHubData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ExperimentHubData")
Introduction to ExperimentHubData HTML
Reference Manual PDF
NEWS Text

Details

biocViews DataImport, GUI, Infrastructure, Software, ThirdPartyClient
Version 1.30.0
In Bioconductor since BioC 3.4 (R-3.3) (7.5 years)
License Artistic-2.0
Depends utils, BiocGenerics(>= 0.15.10), S4Vectors, AnnotationHubData(>= 1.21.3)
Imports methods, ExperimentHub, BiocManager, DBI, httr, curl
System Requirements
URL
See More
Suggests GenomeInfoDb, RUnit, knitr, BiocStyle, rmarkdown, HubPub
Linking To
Enhances
Depends On Me RNAmodR.Data
Imports Me methylclockData
Suggests Me HubPub, MsDataHub, cfToolsData, homosapienDEE2CellScore, JohnsonKinaseData, marinerData, scMultiome, smokingMouse
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ExperimentHubData_1.30.0.tar.gz
Windows Binary ExperimentHubData_1.30.0.zip
macOS Binary (x86_64) ExperimentHubData_1.30.0.tgz
macOS Binary (arm64) ExperimentHubData_1.30.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ExperimentHubData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ExperimentHubData
Bioc Package Browser https://code.bioconductor.org/browse/ExperimentHubData/
Package Short Url https://bioconductor.org/packages/ExperimentHubData/
Package Downloads Report Download Stats