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WeberDivechaLCdata

This is the development version of WeberDivechaLCdata; for the stable release version, see WeberDivechaLCdata.

Spatially-resolved transcriptomics and single-nucleus RNA-sequencing data from the locus coeruleus (LC) in postmortem human brain samples


Bioconductor version: Development (3.20)

Spatially-resolved transcriptomics (SRT) and single-nucleus RNA-sequencing (snRNA-seq) data from the locus coeruleus (LC) in postmortem human brain samples. Data were generated with the 10x Genomics Visium SRT and 10x Genomics Chromium snRNA-seq platforms. Datasets are stored in SpatialExperiment and SingleCellExperiment formats.

Author: Lukas M. Weber [aut, cre] , Heena R. Divecha [aut]

Maintainer: Lukas M. Weber <lmweberedu at gmail.com>

Citation (from within R, enter citation("WeberDivechaLCdata")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("WeberDivechaLCdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("WeberDivechaLCdata")
WeberDivechaLCdata package HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews ExperimentData, ExperimentHub, ExpressionData, Homo_sapiens_Data, RNASeqData, ReproducibleResearch, SequencingData, SingleCellData, SpatialData
Version 1.7.0
License MIT + file LICENSE
Depends ExperimentHub, SpatialExperiment, SingleCellExperiment
Imports utils
System Requirements
URL https://github.com/lmweber/WeberDivechaLCdata
Bug Reports https://github.com/lmweber/WeberDivechaLCdata/issues
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Suggests BiocStyle, knitr, rmarkdown
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package WeberDivechaLCdata_1.7.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/WeberDivechaLCdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/WeberDivechaLCdata
Package Short Url https://bioconductor.org/packages/WeberDivechaLCdata/
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