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TabulaMurisData

This is the development version of TabulaMurisData; for the stable release version, see TabulaMurisData.

10x And SmartSeq2 Data From The Tabula Muris Consortium


Bioconductor version: Development (3.20)

Access to processed 10x (droplet) and SmartSeq2 (on FACS-sorted cells) single-cell RNA-seq data from the Tabula Muris consortium (http://tabula-muris.ds.czbiohub.org/).

Author: Charlotte Soneson [aut, cre]

Maintainer: Charlotte Soneson <charlottesoneson at gmail.com>

Citation (from within R, enter citation("TabulaMurisData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("TabulaMurisData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TabulaMurisData")
Tabula Muris data HTML R Script
Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews ExperimentData, RNASeqData, SingleCellData
Version 1.23.0
License MIT + file LICENSE
Depends R (>= 3.5)
Imports ExperimentHub, utils
System Requirements
URL
See More
Suggests knitr, rmarkdown, BiocStyle, SingleCellExperiment, scran, scater, iSEE, testthat
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TabulaMurisData_1.23.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/TabulaMurisData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TabulaMurisData
Package Short Url https://bioconductor.org/packages/TabulaMurisData/
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