FlowSorted.DLPFC.450k

This is the released version of FlowSorted.DLPFC.450k; for the devel version, see FlowSorted.DLPFC.450k.

Illumina HumanMethylation data on sorted frontal cortex cell populations

Bioconductor version: Release (3.23)

Raw data objects for the Illumina 450k DNA methylation microarrays.

Author: Andrew E Jaffe, Zachary A. Kaminsky

Maintainer: Andrew E Jaffe <andrew.jaffe at libd.org>

Citation (from within R, enter citation("FlowSorted.DLPFC.450k")):

Seminal Bioconductor project articles:

Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M (2015). "Orchestrating high-throughput genomic analysis with Bioconductor." Nature Methods, 12(2), 115–121. doi:10.1038/nmeth.3252.

Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JYH, Zhang J (2004). "Bioconductor: open software development for computational biology and bioinformatics." Genome Biology, 5(10), R80. doi:10.1186/gb-2004-5-10-r80.

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("FlowSorted.DLPFC.450k")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FlowSorted.DLPFC.450k")

FlowSorted DLPFC 450k Guide	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData, Tissue, TissueMicroarrayData
Version	1.48.0
License	Artistic-2.0
Depends	R (>= 3.5.0), minfi(>= 1.21.2)
Imports
System Requirements
URL

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Imports Me	HiBED
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Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	FlowSorted.DLPFC.450k_1.48.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repository	git clone https://git.bioconductor.org/packages/FlowSorted.DLPFC.450k
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/FlowSorted.DLPFC.450k
Package Short Url	https://bioconductor.org/packages/FlowSorted.DLPFC.450k/
Package Downloads Report	Download Stats