Package: HMP2Data
Title: 16s rRNA sequencing data from the Human Microbiome Project 2
Version: 1.23.0
Author: 
    John Stansfield <stansfieldjc@vcu.edu>,
    Ekaterina Smirnova <ekaterina.smirnova@vcuhealth.org>,
    Ni Zhao <nzhao10@jhu.edu>,
    Jennifer Fettweis <jennifer.fettweis@vcuhealth.org>,
    Levi Waldron <levi.waldron@sph.cuny.edu>,
    Mikhail Dozmorov <mikhail.dozmorov@vcuhealth.org>
Maintainer: John Stansfield <stansfieldjc@vcu.edu>, Ekaterina Smirnova <ekaterina.smirnova@vcuhealth.org>
Description: 
    HMP2Data is a Bioconductor package of the Human Microbiome
    Project 2 (HMP2) 16S rRNA sequencing data. Processed data is provided as
    phyloseq, SummarizedExperiment, and MultiAssayExperiment class objects.
    Individual matrices and data.frames used for building these S4 class 
    objects are also provided in the package.
Depends: R (>= 3.6.0)
License: Artistic-2.0
Encoding: UTF-8
LazyData: false
BugReports: https://github.com/jstansfield0/HMP2Data/issues
URL: https://github.com/jstansfield0/HMP2Data
Imports: AnnotationHub, assertthat, dplyr, ExperimentHub, kableExtra,
        knitr, magrittr, methods, readr, S4Vectors,
        SummarizedExperiment, phyloseq, MultiAssayExperiment,
        data.table
Suggests: Biobase, BiocCheck, BiocManager, BiocStyle, cowplot,
        devtools, ggplot2, gridExtra, haven, rmarkdown, roxygen2,
        stats, testthat, tibble, UpSetR
biocViews: ExperimentData, Homo_sapiens_Data, MicrobiomeData,
        ReproducibleResearch, SequencingData
RoxygenNote: 7.1.1
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/HMP2Data
git_branch: devel
git_last_commit: 982e03c
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.22
Date/Publication: 2025-04-17
NeedsCompilation: no
Packaged: 2025-04-17 15:24:57 UTC; biocbuild
