9ad2923842b154602e60a2df4c5d6ba5 *DESCRIPTION
aa4c7b37bd484a30b3c79946e58e69a5 *NAMESPACE
d4627b252e12f776a6767bdc2bda87dc *R/argcheck.R
a83c3b5c514b291008feb131a984763b *R/fromtxdb.R
99529f692bf0fe86963c28d8c73025a8 *R/query-ensembl.R
07a08ee3b18ed376c16629de40401cbf *R/query-ncbi.R
8ee9c37af85cd9ff14dfaa89c1cfc394 *R/query-refseq.R
40b822837dc8718a22623a9984e21d55 *R/query-ucsc.R
44a076f37a99043113c23d43e168fa0b *R/query-utils.R
017905a22ce6ee1affcfc7580a4f2749 *R/reduceops.R
95cb9bb6d34c2fd5a52eee3da38c3b32 *R/sitadela.R
9483f44487dd1aff20e95c18d7e1ded5 *R/testfuns.R
38f4d2dbe3370eb5478f60a6f201e16d *R/zzz.R
40ce731c75df49d1baf9b83e4c47816b *README.md
2169ea507f43cba95df84d054c2de529 *build/vignette.rds
2eccebbe636deb8adc53fb6a920d9f7e *inst/NEWS
fc9bc4beae0e99a7de83f5b572af9c38 *inst/doc/sitadela.R
a0940a3b528b29ec15dfa411b570aeae *inst/doc/sitadela.Rmd
b98c834b67e6a8272e59185970505b87 *inst/doc/sitadela.html
f803c8ead1eb351b382afedbeb9e47b7 *inst/dummy.gtf.gz
37e7b5c4c0129703234485e3e1a965fe *inst/extdata/dasNov3_JH569334.gtf.gz
8412c007f7e63bb47db61d872c80f3b7 *inst/extdata/dasNov3_JH569334.txt.gz
452d87320b0ca202867a5a262edfefcd *inst/extdata/dicLab1_LG3.gtf.gz
a69f029fe1a505bbeb2b307538b0a2fa *inst/extdata/dicLab1_LG3.txt.gz
069fd42bae099702d78596deab2cd554 *inst/extdata/eboVir3_KM034562v1.gtf.gz
e4caeab9d444b69b4fb58ae63f3e3716 *inst/extdata/eboVir3_KM034562v1.txt.gz
d3cb884d380d0c7d0c30c6f846cadcc1 *inst/extdata/gadMor1_HE567025.gtf.gz
61e86e7a60d898986fc767ed1da18619 *inst/extdata/gadMor1_HE567025.txt.gz
ce2848257db257d6ff13c5d40470b13b *inst/script/README.txt
501e1c6e2b3fe70cab5168d6539973ae *inst/unitTests/test_sitadela.R
367f6d1ee1ba9f77bbfda00f000436ce *man/addAnnotation.Rd
2d70eaa97325e98373b9999d29f4d97f *man/addCustomAnnotation.Rd
8a3b8f2faea1534e6182f877b2370686 *man/getAnnotation.Rd
c53dd808e09de6bf4b97aabeabfa6dbd *man/getInstalledAnnotations.Rd
27593a18ae1d4775e23d334407af34d6 *man/getSeqInfo.Rd
bfde292a429bba4bd98c500a8bdc8c4a *man/getUserAnnotations.Rd
ee2abb223fde2aa4463913f54509a2e7 *man/getsetDbPath.Rd
572e1ed704565c36d32fbb50fde5daa4 *man/importCustomAnnotation.Rd
0db268a759db407270dbb7107e010502 *man/loadAnnotation.Rd
7021d124fc4453b239737884b7f8d435 *man/removeAnnotation.Rd
5ac6508270a82eaca28826303a17baa1 *man/testFuns.Rd
de4d8b19357c927effc670c8762dc501 *tests/runTests.R
a0940a3b528b29ec15dfa411b570aeae *vignettes/sitadela.Rmd
