f44aaac51a60237b86f18e87c40f234c *CODE_OF_CONDUCT.md
39623bca9e3d5a5f21cb81cd00647d65 *DESCRIPTION
29a9012941a6bcb26bf0fb4382c5dd75 *LICENSE.md
24655c40cf7a4c51d0ab7e263112d896 *NAMESPACE
a71794ae2f025a42d0f54975a82cce84 *NEWS.md
6395ceee542f988f9b2b6495ed7a33c6 *R/quantiseqr-pkg.R
7f6f996c54d38c864571c41e9a77c88e *R/quantiseqr.R
51244a000b2ea8d60f77a722badd9a9a *R/quantiseqr_helpers.R
d7021ec9f9c7f021287c087cfd54e530 *README.md
a7b7e60cf06517bb4deeca75fe745858 *build/vignette.rds
0fbf9c1eff965d815bb38208773e3a2c *data/dataset_racle.rda
26348446ed6eb150854ce95fbff07256 *data/ti_quant_sim1700mixtures.RData
7114634cfa2188d36e0a365c5b698e92 *inst/doc/using_quantiseqr.R
a4daac000fcb9a02dc790adf12df9d22 *inst/doc/using_quantiseqr.Rmd
87eeac004295059560c9bc18dc6a826b *inst/doc/using_quantiseqr.html
a1975ad6700eba10b3f665e11645f7d8 *inst/extdata/HGNC_genenames_20170418.txt.gz
605111a8088d9510b4f7ad1b8567bf88 *inst/extdata/SRP066571runtable.txt
fde35689d9103423648e53da1d0578a1 *inst/extdata/TIL10_TCGA_aberrant_immune_genes.txt
a118f71221035b273556dd8a72ba3e44 *inst/extdata/TIL10_mRNA_scaling.txt
c667707608135c66a7218e35e600df74 *inst/extdata/TIL10_rmgenes.txt
0e28b38509cd8a2159b693ec0e197b2f *inst/extdata/TIL10_signature.txt
601318d5cebe482b565dc6ec255d8c03 *inst/extdata/metadata.csv
7e439d9647625df9378b8e08347db1a4 *inst/extdata/quanTIseq_SimRNAseq_read_fractions.txt.gz
e6bc12f1638da09a74b96bdc346f3c4c *inst/extdata/quanTIseq_SimRNAseq_sequencing_depth.txt
89a614ce50d67f589eeb624078a1fa79 *inst/scripts/make-data_Song2017.R
e5572f2203b7d17ef9ef8b577d6ce2c9 *inst/scripts/make-metadata.R
22acc9f1f7e9b1948ba80f230edf7725 *man/DClsei.Rd
fc3183e5a0c3ddae72e6d1bdcedad313 *man/DCrr.Rd
f83503e7010dd922751495809a0f8cf4 *man/check_signature.Rd
9f8d62c2bebd8abfd231780e15c220fc *man/dataset_racle.Rd
ed60c52f0f5bd325a7a4e96154a80634 *man/eset_to_matrix.Rd
cc2b30c9195a3d9b1be4a4321a110a53 *man/extract_ti_from_se.Rd
8a393a670675088322b93bbaa130e025 *man/fixMixture.Rd
61b2d5b01c5ef0946010b218a40b2058 *man/get_densities.Rd
fa8bc44f8a36204c07b24d8367eada72 *man/makeQN.Rd
e2ea2896c0ac7fd9874ca2ed9465d83c *man/mapGenes.Rd
a7dffc731ecdd3d80c6725cd16759b38 *man/quanTIseq.Rd
5f5c32624c5c27262e1b810f643286ef *man/quantiplot.Rd
eefdb1ce6bde71f92925920021a29672 *man/quantiseq_helper.Rd
9e4c552b05024948eef562dc2257b86c *man/quantiseqr-pkg.Rd
54858214afa41d301ee62622240deb8e *man/run_quantiseq.Rd
9065136b5fc1bc3cdca59c8f616ac365 *man/se_to_matrix.Rd
bf3c313dd33e62d9174a6dc9d1be5580 *man/ti_quant_sim1700mixtures.Rd
9109d210272fdc42e4370c0acb7dff16 *tests/testthat.R
315757217353e31eb14f82793386182c *tests/testthat/setup-quantiseqr.R
ce22931bce1e83b4e97bbb5e79e3c3ce *tests/testthat/test-run_quantiseq.R
2badceec26db5f93d13decb4316f1d63 *vignettes/img/concepts_deconvolution.gif
e59f660a538cb7d83e9bef2aae72f485 *vignettes/references_quantiseqr.bib
a4daac000fcb9a02dc790adf12df9d22 *vignettes/using_quantiseqr.Rmd
