97aec31d5cb3114550712dedc78c5068 *DESCRIPTION
c0ed1a8dfc43d05140b43a5922da9153 *NAMESPACE
fcd7681f6b18d418879dcc9fe148b72b *NEWS
62442a530432b26973adb8bac07e22eb *R/ncRNAtools_RNAcentralAccessFunctions.R
fb3287ece85bdbf907ab86849d4b9a6b *R/ncRNAtools_checkInputFunctions.R
47b5767c8884c8df44c1d5bcc053a6ea *R/ncRNAtools_otherSupportFunctions.R
0462e3264f30d3d6c58eacd2f92f1fef *R/ncRNAtools_plottingFunctions.R
2037e79881b67cb71d2b9a024179cd31 *R/ncRNAtools_readWriteFunctions.R
5bf552b3f2b755107d19f82083557c79 *R/ncRNAtools_secondaryStructurePredictionFunctions.R
e4dfab6e3e119647af58c80fa0e715da *R/ncRNAtools_variableDefinitions.R
feb791356e8e340dfa26979a82d50df3 *build/vignette.rds
70def3b83578e6342832059cb1363995 *inst/doc/ncRNAtools.R
7e30ff1a872a31d47b323ea2c36b0d8e *inst/doc/ncRNAtools.Rmd
3123a7ce2c3e5d12a76bc5fac41571c3 *inst/doc/ncRNAtools.html
f2dfd5507096fd97fbce264a42f93860 *inst/extdata/exampleBasePairProbabilitiesTable.csv
fb58d160ef51f835ab2fb9304d341924 *inst/extdata/exampleCT.ct
f98149d8f43f991e29c9701ae5061433 *inst/extdata/exampleDotBracket.dot
c840b6a6fad1bd55ad6cf015924d5810 *inst/unitTests/test_otherFunctions.R
3df9348b4fa1e798a58a222ccd2184ba *inst/unitTests/test_rnaCentralAccess.R
5ce05ddaba580fa6b56117a45afa4133 *inst/unitTests/test_secondaryStructurePrediction.R
e170355d1b0d4915fe41d73b31013288 *man/findPairedBases.Rd
b858dfe1cedf14c21dea0e226bb13608 *man/flattenDotBracket.Rd
422d7169ebb4c372f3076f75819227cd *man/generatePairsProbabilityMatrix.Rd
1a1d0e4ebc67e56626758d188c982cc8 *man/pairsToSecondaryStructure.Rd
1a8a9873a6113c232405f3bfe932d18a *man/plotCompositePairsMatrix.Rd
cce01de67c004033586f33df1aeef68a *man/plotPairsProbabilityMatrix.Rd
3a7608ed55946b125af85caf9c084dc4 *man/predictAlternativeSecondaryStructures.Rd
8de6ee434aa4498fb859aac5004a40a9 *man/predictSecondaryStructure.Rd
9d22bc6d3650812ad04a9e68e3d9fb79 *man/readCT.Rd
51ce52474d82091af94fae464b6c9bf8 *man/readDotBracket.Rd
369c5adfa096bc4c02498155dfd8a557 *man/rnaCentralGenomicCoordinatesSearch.Rd
985e889edc0cb1a06e404052c8eb0faf *man/rnaCentralRetrieveEntry.Rd
30b9defb824d8add608644f6f15311ed *man/rnaCentralTextSearch.Rd
c341a5a0c3149b415f24a54b21990399 *man/writeCT.Rd
afca5dccd6283027e967c0604853c955 *man/writeDotBracket.Rd
523a2eadc94b00a2a977760f34eee6c2 *tests/runTests.R
59515cb62af2fb860b7b19a900a25cca *vignettes/knitcitations.bib
9976250a2773247126c230e28d45049d *vignettes/mystyle.css
7e30ff1a872a31d47b323ea2c36b0d8e *vignettes/ncRNAtools.Rmd
3974273036b6f427339e2a8cc4307104 *vignettes/template.csl
