5e23266697ad983dc24dc8d3c618e626 *DESCRIPTION
4a00b59a6f7e96a96e8e08123f66d457 *NAMESPACE
6e2b27131d7db406b6badf2c6e24f84c *NEWS
d9ef697d12df67de53f258c4ef973160 *R/ROKU.R
54cb079ed005b373dc279a66eff42a14 *R/TCC.R
44ac21f57d4a2de974e9fdeb46d3fab4 *R/TCC.calcNormFactors.R
aafacd6926b64928baccd76e7d11e509 *R/TCC.estimateDE.DESeq.R
36c0f99bf3de914b5aa593020ceef45b *R/TCC.estimateDE.DESeq2.R
c1180386b7b34e1e2ac20d53fe84903e *R/TCC.estimateDE.R
1a202dc6cbed62353c935eda45daf120 *R/TCC.estimateDE.SAMseq.R
950b3a8359da0e55d3c51c855cae2eb7 *R/TCC.estimateDE.WAD.R
c123fc3a622fdeb9405f6f8e03730a5c *R/TCC.estimateDE.YAYOI.R
521686dd4f72baf7791c1d0397043e0d *R/TCC.estimateDE.baySeq.R
3edf0ea2b9d209e10998f52d180d57d6 *R/TCC.estimateDE.edgeR.R
5e1285343acee83968a6664ee8f6beb8 *R/TCC.estimateDE.limmavoom.R
5ccfb61604c3e1e7dd087869db58847a *R/TCC.generic.R
29339f8ed2a0d9867216b8b2e4739a62 *R/TCC.getNormalizedData.R
6e9a6b753a2ee4658fefd2f7e99ecd64 *R/TCC.plotMA.R
96991a120aa2fe7a7b383a35df866949 *R/TCC.public.R
eb7de905320f1ead1d426937fad37888 *R/TCC.simulation.R
ded3d373d83f2529552710d7c1cb921b *R/TCC_0.4.R
6c511abe024af9316f553062bae151d9 *R/WAD.R
aa42d1a95823480f25d07e15e4a1dbd4 *R/YAYOI.R
56a3d57983341fe92ca8504cf2b32f7c *R/clusterSample.R
761a0cfa8dd9ea88aea75ce8ae059f08 *build/vignette.rds
57969bfc430eb673c9b3c73bfc26b809 *data/arab.RData
ec4e42fc8cf72b68b8b6019dc61af7c8 *data/hypoData.RData
89ea34783e95728fd186101b0cf419e8 *data/hypoData_mg.RData
c4990b1c10de8cbc28993fd0d42a4fb8 *data/hypoData_ts.RData
19cad0e7dfa0b7b987c1b578e8b23ec6 *data/nakai.RData
b72d73cb3557dc8e592a11c57d2aab97 *inst/CITATION
40099e05bad970aecec69fa2442b6862 *inst/doc/TCC.R
97f963f4c8e0a4451afb5ce6547b90b2 *inst/doc/TCC.Rnw
755e9bbbdb0818dc6719fdc87211f847 *inst/doc/TCC.pdf
af16760b4c4fe1f82a0fb64b66ff1d5a *inst/unitTests/test_calcNormFactors.R
5af1b6f3a1a4b24057cd62e2771695a1 *inst/unitTests/test_estimateDE.R
454aa6702e73c11164c73a5e293b5be1 *inst/unitTests/test_getResult.R
79aa39382f0140265aa92acc938d61f1 *inst/unitTests/test_new.R
6bfdaef132cfb639dde7f0449dc87959 *inst/unitTests/test_plot.R
7582ae69294f2006714734cb293217d7 *inst/unitTests/test_plotFCPseudocolor.R
351430237f12b7992a0898c1376d24b6 *man/ROKU.Rd
0cce5da106e35ae7a445cf80fb81d604 *man/TCC-class.Rd
41e55fd4de718a999f3d94494ab2e98b *man/TCC.Rd
77b0b01153d93b88616c9db4bc22ea94 *man/WAD.Rd
e8f042352786966c8d8babba752cbb9c *man/arab.Rd
dc0f460d87c79d5aeee738df08edfee3 *man/calcAUCValue.Rd
256405e5d62a4bbb3fcb5f9aba118b08 *man/calcNormFactors.Rd
7247a24ccc01cd2e7b92a3c25d76517b *man/clusterSample.Rd
5d635289788bf050afda2d94701d1a0d *man/estimateDE.Rd
0eee65999a9148c078eac20d37bd47da *man/filterLowCountGenes.Rd
4b01ad8a8e18e9cdb4b6eeac4cf8ca51 *man/getNormalizedData.Rd
11a51905d1c42c810be7d34cde5279a1 *man/getResult.Rd
b4e4561bf70e3b4d40e0a5b384fa04e8 *man/hypoData.Rd
8f09bcfab031fc931df0c480363aa570 *man/hypoData_mg.Rd
52e73520d36a5da83b4909dc107e22f8 *man/hypoData_ts.Rd
91d68181fe48ebddd29662f0ddbe3993 *man/makeFCMatrix.Rd
e6e4363a54348941759465cd28351384 *man/nakai.Rd
b476e28b51520da675a31c457e34c8fe *man/plot.TCC.Rd
aac9dc53b25cab257af2c96effef7656 *man/plotFCPseudocolor.Rd
c8970f7153fd184d5085c67f0b7aa086 *man/simulateReadCounts.Rd
d063ea5d9077912acbfdf7268ceafa6a *tests/runTests.R
97f963f4c8e0a4451afb5ce6547b90b2 *vignettes/TCC.Rnw
