813464ec939a3924cafa1c812a0c880b *DESCRIPTION
056e47c280c2945ebb08d5e16102e049 *NAMESPACE
2ef6ca20440da9577f28a8d5d8f73b0b *R/ECDFPlot.R
3232629b759b9d9953caf48288aa1454 *R/PCAPlot.R
fee49ce7aa0d160638b840164c0d0bbe *R/RLEPlot.R
10597865dad55290f38c5fd246d32615 *R/RUVNaiveRidge.R
0e93c8384c041160e9a6c361861cc6b8 *R/RUVcorr.R
52027a4e49de7208837b26013ee20710 *R/assessQuality.R
191e8035d4ef2e52e3437f81e346c9c6 *R/background.R
4985c8f2a55589fe413daf7bbdae8649 *R/calculateThreshold.R
a10a4a980283c0b3137fe76952494dca *R/compareRanks.R
02caf77374f096c0ecbf35cf8dc3e5d2 *R/correlationPlot.R
b3de10178ae2f29435772c4ef6f6606a *R/eigenvaluePlot.R
19901a4daf8fb7de30ebfa4d6e8dddfe *R/empNegativeControls.R
94ee62b65bee9eb3748e9e266514d729 *R/findIQR.R
c3f582e11b0bcf140603c032ad34f50d *R/findMinmaxSamples.R
8e692e119f46af68a12f672ffde1ded7 *R/findWeights.R
18cd5ba5bb8ff03b88e2e18ac220c365 *R/funcPara.R
8a8347e5ea18fc8b72166d2839b02dd8 *R/funcThresh.R
60a4500d30d7ac81e4a2d53a403b2a43 *R/genePlot.R
1fa80e21ea4f432a441f061f9b3e2a05 *R/histogramPlot.R
b6e41e1016b7002d4727fdde7dab87ef *R/is.optimizeParameters.R
38254402783eb11209c82a45a7fd4a3b *R/is.simulateGEdata.R
384576fa8ffa205be3443374e48aa217 *R/makePosSemiDef.r
fb0260b1e5bb09259e6f3a081ba1d5d3 *R/makeRankedList.R
3d898f8da2994c3e169e60ad52b9a4a6 *R/mashUp.R
be36f52871288dd058fa1f9d36bc6053 *R/optimizeParameters.R
0de181c4b59af7d8f04d39d1c89ee6cb *R/plot.optimizeParameters.r
44e5529f08ae1ba1db4aa84c8312cca8 *R/plotDesign.R
2bdd80366f096cc1ee68eb528d1895d1 *R/plotThreshold.R
1d368762c123e6190a398ace84c8b648 *R/print.simulateGEdata.R
ad0610cad8f0270fceffc05a7d014081 *R/prioritising.r
becfcb4532246f370e3cfa83c27b9b2f *R/simulateGEdata.R
47aa63f77c642fecf7f58b3b09eb9892 *R/splitByFactor.R
daae23da3ad96ec5a1b98681a073be72 *R/wcor.R
b097cad94a09068b7fe72f87a7918aea *build/vignette.rds
91a9282c8893f9bf5098dedce2c36014 *inst/NEWS.Rd
4118c7a59cba88777ba194ec9e9ee520 *inst/doc/Vignette.R
295fc19628cb95a34e544b076dc032fa *inst/doc/Vignette.Rmd
74826c27a7c66e83f8828eec8c18281d *inst/doc/Vignette.html
c4cccfd8bd402c8a805665168bccb248 *man/ECDFPlot.Rd
27083672010872c4cfc8c2ada33be5a4 *man/PCAPlot.Rd
36474fe39f5b4d5253012dc1b705a868 *man/RLEPlot.Rd
ff47d401f09aa4b58312012d8044b444 *man/RUVNaiveRidge.Rd
7d2ad5bccf614d5c20eebfc456392129 *man/RUVcorr.Rd
bc9260fa6086e4c974e10435f2d45c9b *man/assessQuality.Rd
f6f49989e1a76d31c20acd88611f96f1 *man/background.Rd
e3984e302fb059f6b327b9698f109ac4 *man/calculateThreshold.Rd
9b7213b058fe9f7a186b103213dcf733 *man/compareRanks.Rd
7754d99e2de9196ba198fc98656f15bf *man/correlationPlot.Rd
c6cf6cd6ee77da4f03ab740c8e298d5b *man/eigenvaluePlot.Rd
713453210bd7191e251e6852d8a466f9 *man/empNegativeControls.Rd
7b0538fe4c57d294b5268a59c796666d *man/findIQR.Rd
6ea1ad5a8abd1f45f18f602671d99fa1 *man/findMinmaxSamples.Rd
8a638a13d5f750e64b5215ecd304da01 *man/findWeights.Rd
1a669eb63f2b49f637cf8f46f300af69 *man/funcPara.Rd
99d30191d20759dc57086f771b2792c7 *man/funcThresh.Rd
33749ac2d36736d632f0775fbe88e8aa *man/genePlot.Rd
67700acf1f37821aba65365f89530335 *man/histogramPlot.Rd
ca2639e4b1fad7f1fb278ec81fa30c3a *man/is.Threshold.Rd
d65d43a592678474d37278adeef6dbab *man/is.Weights.Rd
8b636928a8b9aab546221dcc54f6233c *man/is.optimizeParameters.Rd
d0966032d1a58dd5ef956d46ab43e384 *man/is.simulateGEdata.Rd
6a2e8ec23f22b5935e908a1b8df42bb7 *man/makePosSemiDef.Rd
3ad6fa056cb2855552976630075dcc8c *man/makeRankedList.Rd
b859f85ad92b29f0e52cf3af2dcc3908 *man/mashUp.Rd
99e3add7a23df952f153ccd90f832f3f *man/optimizeParameters.Rd
b76f7607850a40a3f48f443cdab521ae *man/plot.optimizeParameters.Rd
911d5dd0e8b0385261563c4eeb318448 *man/plotDesign.Rd
d1b44d63879de81c76cd111ad84c77c1 *man/plotThreshold.Rd
59f827847ba5cc40c2a7823e34077786 *man/print.simulateGEdata.Rd
080e2d30cd1e8aaf346422de442df285 *man/prioritise.Rd
7ec60ba81c50718ff4641a7e0bed0b81 *man/simulateGEdata.Rd
c34da2fabb6547f8801967fd8ee5abd3 *man/splitByFactor.Rd
4c4b8b2db936b9c8266796bec29d76e9 *man/wcor.Rd
295fc19628cb95a34e544b076dc032fa *vignettes/Vignette.Rmd
