Add one or more edges to a Cytoscape network by listing source and target node pairs.
addCyEdges( source.target.list, edgeType = "interacts with", directed = FALSE, network = NULL, base.url = .defaultBaseUrl )
| source.target.list | A |
|---|---|
| edgeType | The type of interaction. Default is 'interacts with'. |
| directed |
|
| network | (optional) Name or SUID of the network. Default is the "current" network active in Cytoscape. |
| base.url | (optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3. |
A list of named lists of SUID, source and target for each edge added.
# \donttest{ addCyEdges(c('sourceNode','targetNode')) addCyEdges(list(c('s1','t1'),c('s2','t2'))) # }