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Graph examples and use cases in Bioinformatics

Bioconductor version: Release (3.19)

This package provides examples and code that make use of the different graph related packages produced by Bioconductor.

Author: Li Long <li.long at>, Robert Gentleman <rgentlem at>, Seth Falcon <sethf at> Florian Hahne <fhahne at>

Maintainer: Florian Hahne <florian.hahne at>

Citation (from within R, enter citation("biocGraph")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Examples of plotting graphs Using Rgraphviz PDF R Script
HOWTO layout pathways PDF R Script
Reference Manual PDF


biocViews GraphAndNetwork, Software, Visualization
Version 1.66.0
In Bioconductor since BioC 2.1 (R-2.6) (17 years)
License Artistic-2.0
Depends Rgraphviz, graph
Imports Rgraphviz, geneplotter, graph, BiocGenerics, methods
System Requirements
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Suggests fibroEset, geneplotter, hgu95av2.db
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Follow Installation instructions to use this package in your R session.

Source Package biocGraph_1.66.0.tar.gz
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macOS Binary (x86_64) biocGraph_1.66.0.tgz
macOS Binary (arm64) biocGraph_1.66.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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