SimBu                   SimBu: Bias-aware simulation of bulk RNA-seq
                        data with variable cell type composition
census                  Applies the Census count transformation on a
                        count matrix
dataset                 Build SummarizedExperiment using local
                        annotation and count matrix R objects
dataset_h5ad            Build SummarizedExperiment using a h5ad file
                        for the counts
dataset_merge           Merge multiple SummarizedExperiment datasets
                        into one
dataset_seurat          Build SummarizedExperiment using a Seurat
                        object
dataset_sfaira          Build SummarizedExperiment using a single
                        sfaira entry ID
dataset_sfaira_multiple
                        Build SummarizedExperiment using multiple
                        sfaira entries
merge_simulations       Combine multiple simulations into one result
plot_simulation         Plot the cell-type fractions in your simulated
                        dataset
save_simulation         Save the expression matrix of a simulated
                        pseudo-bulk dataset to a file
setup_sfaira            setup the sfaira package
sfaira_overview         Gives an overview of the possible datasets you
                        can use from the sfaira database
simulate_bulk           Simulate whole pseudo-bulk RNAseq dataset
