.extractSCE             Extract metadata from 'SingleCellExperiment'
                        object
.extractSeurat          Extract metadata from 'Seurat' object
convertDataToList       Convert counts or proportions matrix to list
                        object for propeller
estimateBetaParam       Estimate the parameters of a Beta distribution
estimateBetaParamsFromCounts
                        Estimate parameters of a Beta distribution from
                        counts
getTransformedProps     Calculates and transforms cell type proportions
ggplotColors            Output a vector of colours based on the ggplot
                        colour scheme
normCounts              Normalise a counts matrix to the median library
                        size
pbmc_props              Cell type proportions from single cell PBMC
                        data
plotCellTypeMeanVar     Plot cell type counts means versus variances
plotCellTypeProps       Plot cell type proportions for each sample
plotCellTypePropsMeanVar
                        Plot cell type proportions versus variances
propeller               Finding statistically significant differences
                        in cell type proportions
propeller.anova         Performs F-tests for transformed cell type
                        proportions
propeller.ttest         Performs t-tests of transformed cell type
                        proportions
speckle_example_data    Generate example data
