# GeoMxWorkflows

## Scope & Overview

GeoMxWorkflows is a package that contains analysis vignettes for analyzing data from
NanoString GeoMx Digital Spatial Profiler (DSP). It is intended as a instructive 
package, which demonstrates the application of other open source packages for the 
purposes of interpreting GeoMx data.

## Branches

The master branch is the stable version of the Bioconductor package.

The dev branch is under active development and no guarantee is made on
usability at any given time. 

## Citation

### GeomxTools

Ortogero, N.; Yang, Z.; Vitancol, R.; Griswold, M.; Henderson, D. GeomxTools: NanoString GeoMx Tools. R Package Version 1.0.0. NanoString Technologies Inc.; Seattle, WA 98109, USA. 2021.

### GeoMxWorkflows

Reeves, J.W.; Divakar, P.; Ortogero, N.; Griswold, M.; Yang, Z.; Zimmerman, S.; Vitancol, R.; and Henderson, D. GeoMxWorkflows: GeoMx Digital Spatial Profiler (DSP) data analysis workflows. R Package Version 1.0.0. 
NanoString Technologies Inc.; Seattle, WA 98109, USA. 2021. 

## License
This project is licensed under the [MIT license](LICENSE).
