Package: ExpressionNormalizationWorkflow
Type: Package
Title: Gene Expression Normalization Workflow
Version: 1.37.0
Published: 2014-04-30
Authors@R: as.person(c(
    "Karthikeyan Murugesan<karthikeyanm60@yahoo.com> [aut, cre]",
    "Greg Gibson<ggibson.gt@gmail.com> [sad, ths]"
    ))
Description: An extensive, customized expression normalization workflow
    incorporating Supervised Normalization of Microarryas(SNM), Surrogate Variable
    Analysis(SVA) and Principal Variance Component Analysis to identify batch
    effects and remove them from the expression data to enhance the ability to
    detect the underlying biological signals.
Imports: Biobase (>= 2.24.0), limma (>= 3.20.9), lme4 (>= 1.1.7),
        matrixStats (>= 0.10.3), pvca (>= 1.4.0), snm (>= 1.12.0), sva
        (>= 3.10.0), vsn (>= 3.32.0)
VignetteBuilder: knitr
biocViews: ImmunoOncologyWorkflow, Workflow, GeneExpressionWorkflow
Suggests: knitr, BiocStyle
License: GPL (>=3)
Encoding: UTF-8
BugReports: https://github.com/
RoxygenNote: 5.0.1.9000
git_url:
        https://git.bioconductor.org/packages/ExpressionNormalizationWorkflow
git_branch: devel
git_last_commit: bea5c91
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
Date/Publication: 2025-11-04
NeedsCompilation: no
Packaged: 2025-11-04 18:10:03 UTC; biocbuild
Author: Karthikeyan Murugesan [aut, cre],
  Greg Gibson [sad, ths]
Maintainer: Karthikeyan Murugesan <karthikeyanm60@yahoo.com>
