geneplast.data.string.v91

This is the development version of geneplast.data.string.v91; for the stable release version, see geneplast.data.string.v91.

Input data for the geneplast package

Bioconductor version: Development (3.24)

The package geneplast.data.string.v91 contains input data used in the analysis pipelines available in the geneplast package.

Author: Sheyla Trefflich, Rodrigo Damolin, Mauro Castro.

Maintainer: Sheyla Trefflich <sheylatrefflich at gmail.com>, Mauro Castro <mauro.a.castro at gmail.com>

Citation (from within R, enter citation("geneplast.data.string.v91")):

Seminal Bioconductor project articles:

Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M (2015). "Orchestrating high-throughput genomic analysis with Bioconductor." Nature Methods, 12(2), 115–121. doi:10.1038/nmeth.3252.

Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JYH, Zhang J (2004). "Bioconductor: open software development for computational biology and bioinformatics." Genome Biology, 5(10), R80. doi:10.1186/gb-2004-5-10-r80.

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("geneplast.data.string.v91")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation


Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	AnnotationData, FunctionalAnnotation
Version	0.99.6
License	Artistic-2.0
Depends	R (>= 3.5)
Imports
System Requirements
URL

Suggests
Linking To
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Depends On Me
Imports Me
Suggests Me	geneplast
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	geneplast.data.string.v91_0.99.6.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url	https://bioconductor.org/packages/geneplast.data.string.v91/
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