compounds_v1: serialization of compounds info from PharmacoDb v1 — compounds_v1 • pogos

# compounds_v1: serialization of compounds info from PharmacoDb v1

Source: `R/data.R`
`compounds_v1.Rd`

compounds_v1: serialization of compounds info from PharmacoDb v1

    compounds_v1

    tissues_v1

    cell_lines_v1

    datasets_v1

    CCLE_drts

## Format

S4Vectors DataFrame instance

S4Vectors DataFrame instance

S4Vectors DataFrame instance

S4Vectors DataFrame instance

DRTraceSet instance

## Source

PharmacoDb Sept 2017

PharmacoDb Sept 2017

PharmacoDb Sept 2017

PharmacoDb Sept 2017

PharmacoDb April 2018

## Examples

    data(compounds_v1)
    head(compounds_v1)
    #> DataFrame with 6 rows and 2 columns
    #>          id                   name
    #>   <numeric>            <character>
    #> 1         1      (5Z)-7-Oxozeaenol
    #> 2         2 16-beta-bromoandrost..
    #> 3         3                 17-AAG
    #> 4         4            1S,3R-RSL-3
    #> 5         5              3-Cl-AHPC
    #> 6         6                 5-FdUR
    data(tissues_v1)
    head(tissues_v1)
    #> DataFrame with 6 rows and 2 columns
    #>          id              name
    #>   <numeric>       <character>
    #> 1         1     adrenal_gland
    #> 2         2 autonomic_ganglia
    #> 3         3     biliary_tract
    #> 4         4             blood
    #> 5         5              bone
    #> 6         6             brain
    data(cell_lines_v1)
    head(cell_lines_v1)
    #> DataFrame with 6 rows and 2 columns
    #>          id        name
    #>   <numeric> <character>
    #> 1         1       105KC
    #> 2         2      1321N1
    #> 3         3        143B
    #> 4         4       184A1
    #> 5         5       184B5
    #> 6         6        2004
    data(datasets_v1)
    head(datasets_v1)
    #> DataFrame with 6 rows and 2 columns
    #>          id        name
    #>   <numeric> <character>
    #> 1         1        CCLE
    #> 2         5    GDSC1000
    #> 3         4        gCSI
    #> 4         6        GRAY
    #> 5         3        FIMM
    #> 6         2      CTRPv2
    data(CCLE_drts)
    CCLE_drts
    #> DRTraceSet for 5 cell lines, drug Irinotecan, dataset CCLE