DRTraceSet class manages dose-response information for a single cell line, multiple drugs — DRTraceSet-class • pogos
Description: DRTraceSet class manages dose-response information for a single cell line, multiple drugs DRTraceSet constructor for multiple cell lines, single drug, single dataset

# DRTraceSet class manages dose-response information for a single cell line, multiple drugs

Source: `R/lkcomb.R`
`DRTraceSet.Rd`

DRTraceSet class manages dose-response information for a single cell line, multiple drugs

DRTraceSet constructor for multiple cell lines, single drug, single dataset

    # S4 method for DRTraceSet,missing
    plot(x, y, ...)

    DRTraceSet(
      cell_lines = c("SK-ES-1", "TC-71", "MHH-ES-1", "HCC-56", "SK-HEP-1"),
      drug = "Irinotecan",
      dataset = "CCLE"
    )

## Arguments

x

  for plot: instance of DRTraceSet

y

  for plot: not used

...

  not used

cell_lines

  character vector of cell line names, must be found in `cell_lines_v1` data of pogos package

drug

  character(1) drug name in `compounds_v1`

dataset

  character(1) dataset known to pharmacodb.pmgenomics.ca

## Value

instance of DRTraceSet

## Note

Will query pharmacodb for relevant dose-response information

## Examples

    DRTraceSet()
    #> DRTraceSet for 5 cell lines, drug Irinotecan, dataset CCLE