DRProfSet is a class for managing dose-response information about cell lines from a pharmacogenomics dataset — DRProfile-class • pogos
Description: DRProfSet is a class for managing dose-response information about cell lines from a pharmacogenomics dataset getDrugs extracts drug list DRProfSet manages all data from a given cell line from a pharmacogenomics source

# DRProfSet is a class for managing dose-response information about cell lines from a pharmacogenomics dataset

Source: `R/lkcomb.R`
`DRProfSet.Rd`

DRProfSet is a class for managing dose-response information about cell lines from a pharmacogenomics dataset

getDrugs extracts drug list

DRProfSet manages all data from a given cell line from a pharmacogenomics source

    getDrugs(x)

    DRProfSet(cell_line = "MCF7", dataset = "CCLE")

    # S4 method for DRProfSet,missing
    plot(x, y, ...)

## Arguments

x

  instance of DRProfSet

cell_line

  character(1) cell line name, entries in cell_lines_v1

dataset

  character(1) resource name, entries in datasets_v1

y

  for plot: not used

...

  not used

## Value

getDrugs: character vector

instance of DRProfSet

## Examples

    if (interactive()) trs = DRTraceSet() else trs = iriCCLE()
    ps = traces(trs)[[1]]
    ps
    #> DRProfSet with 1 dose-response profiles for cell line SK-ES-1
    #>  dataset: CCLE
    getDrugs(ps)
    #> [1] "Irinotecan"
    if (interactive()) DRProfSet()