f26369bb123e82f05f3f04425bbcc3d3 *DESCRIPTION
4eb62b58f1f7b9453f5f148979996847 *LICENSE
f1d2f5eabf357ccd627378822cba04f0 *NAMESPACE
3ef4db44dae13c1d8ba1243dea81f084 *NEWS.md
f1be34527d9d566d5adb960a3d70a6df *R/chevreulShiny-package.R
44eb89a7650c7a31d58be6a9e36f410d *R/chevreul_app.R
f635463b495dc76d21787d166f7deffe *R/custom_ui.R
e198b683a204f417bdad760bebc67448 *R/data.R
ced41fe0b7fac502a649ae74c0961481 *R/data_edit.R
db5fea9b3efc4dcce692dbf3fadbdda0 *R/ensembl_version.R
8cbd0ff10a0a41181aa095b6f9bb82c1 *R/globals.R
496bf9b23dd265cc3f1d52c2314d7fd3 *R/grch38.R
e52139328a3251376f992fbcd83cd838 *R/grch38_tx2gene.R
8fc9361ecbc213b92fc5018690239f47 *R/minimal_chevreul_app.R
c48923ed56d3dcd7a268692b11b6443d *R/project_management.R
574567152f1233310c9dc8d3844ac7e3 *R/shiny_modules.R
efc07adaec52952c6970adca9dd2f5cf *R/utils-logic.R
8229dddde34802ee077b5bb1ba02ff6a *R/utils.R
fd182dd36308b4be4b010bb0e22fe511 *R/wiggleplotr.R
5e693157935acb19352de7cb0eb75508 *R/zzz.R
0550d21a08b7382109a82501e41ac4a8 *README.md
38b2133d93a7d4d29fedc4e6ae35478b *build/vignette.rds
2ccf75123af353a1a1f8f5a21515f97b *data/cc.genes.cyclone.rda
a2836db662b6235dc62a61ff1f20d628 *data/datalist
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3331cb250ec832a762355eea0b818947 *data/grch38.rda
74fcfb29d7f71822757b66a04381667b *data/grch38_tx2gene.rda
d4533f042b8597f884d34376c691fe06 *data/human_to_mouse_homologs.rda
87babfb86adcf0c5457fdd253d34b697 *data/small_example_dataset.rda
975ba610f49e326c111357a0320cf3cf *data/tiny_sce.rda
0b4cd9a5d3e167c4a0a06a14cb3ba9db *inst/doc/chevreulShiny.R
8f60a33083580b25aaaf3da008dc5c3e *inst/doc/chevreulShiny.Rmd
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c6f090a130d24eee021c0c481f52b688 *inst/helpers/allTranscripts.md
fc6578cc2c12cbd4c664590a0ce133f2 *inst/helpers/clustree.md
9f82eafa05c6dbfd2148867cca892a54 *inst/helpers/comparePlots.md
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a160e7ca7b2399afeaaef3cb4a40b537 *inst/helpers/heatMap.md
acccbd4c77212b2f270373fe163a3857 *inst/helpers/integrateProjects.md
4829817423ef56eeb7858ce04991aabc *inst/helpers/overview.md
0ce4579fe4d4077540ef7311e24777b5 *inst/helpers/pathwayEnrichment.md
020d8448f45d0c81ef051c0bd0a2f74c *inst/helpers/plotVelocity.md
3e011c49b84d452e45d88274c65d3cc0 *inst/helpers/preprocessing.md
be835776792d60c4634db1351eb102bc *inst/helpers/reformatMetadata.md
51319332c1827436a356bbb5b41de2b8 *inst/helpers/regressFeatures.md
9d122ae7cdcc56dde412fdf251c67b39 *inst/helpers/subsetChevreul.md
e4404cccb01e91ef4cf057bca0ee485c *inst/helpers/violinPlot.md
0c141b060b0d8855496c66a9713a398c *man/append_to_project_db.Rd
e000845bd43ef652ab867a9c3e1d0ddc *man/cc.genes.cyclone.Rd
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49f3461a744d115bc3dce9410d0b9d55 *man/chevreulShiny-package.Rd
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3edb06a591803d4cc5d465f4b9079bb2 *man/create_project_db.Rd
8d9353239ce47867d4983d56b7e64496 *man/ensembl_version.Rd
094ada6352f6256b28dd6eae8535f6a0 *man/get_transcripts_from_sce.Rd
98c2c304e6fa7eddbe511a8154b4155a *man/grch38.Rd
0bfd8bfaa56301b0ca131fa58e407c3a *man/grch38_tx2gene.Rd
ae9708a8efe49a58da1a1ac0a505b97a *man/human_to_mouse_homologs.Rd
1cb9770302e691946b6a69f7fbb7cd38 *man/list_plot_types.Rd
38716fc0b1fa88d14dc5830606408252 *man/load_alabaster_from_proj.Rd
79f106324f056ad947fdbc29f2f2c6d3 *man/load_alabaster_path.Rd
dfbfaf3897bebfdbd74664bec8ee2293 *man/load_bigwigs.Rd
ea42199c90fa84248097e084245ac31f *man/make_bigwig_db.Rd
22f271624629da19d41ebe248ae8a5fc *man/make_chevreul_clean_names.Rd
e1c2471d6ef57059389fb12f6a223f5f *man/metadata_from_batch.Rd
d647392a1404056190a54c66de70bb82 *man/minimalChevreulApp.Rd
470afb3aa3624a03b5b7c637d759826f *man/plot_gene_coverage_by_var.Rd
9a088d53b3b1b13d1ffa75f49a9c8ff7 *man/plotly_settings.Rd
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919c818cfaca5a551be17c661cff37b6 *man/update_project_db.Rd
3fcd668759866d1b09092aa62eb479e8 *tests/testthat.R
245d385c7f3cf80f4ba0353667abaa9e *tests/testthat/helper-data.R
fb0029afda6cf80f25de209edcb23745 *tests/testthat/test-list_plot_types.R
e9286401887dc2380968403af071dcc4 *tests/testthat/test-unite_metadata.R
8f60a33083580b25aaaf3da008dc5c3e *vignettes/chevreulShiny.Rmd
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4b415de812d6724f44e5d0add37309ba *vignettes/images/PlotCoverage2.0.png
4ea818c2b74854d11e29d77d5560ebaf *vignettes/images/clustree.png
4ad809841042c73db0020a5c4c49b410 *vignettes/images/integration_image.png
4e5466305576979e5d67253e7d1ccc58 *vignettes/images/integration_result.png
b7dc4ec1332a0c464224dec46bfd20fc *vignettes/images/louvain_and_feature_umap_plot.png
c3299cead27295d2417bc1e134c9b432 *vignettes/images/marker_gene_plot.png
be3adfa0ba92f977150ba93e0b690fb5 *vignettes/images/pair_of_histograms.png
cd4ee62861e5c0c099077c08fae6f083 *vignettes/images/transcript_composisiont.png
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e4108e585c2061d8d856c968d0e0478c *vignettes/shiny_app.Rmd
