463bd2e8aa35cf718e4370208ccb9c63 *DESCRIPTION
489114458a82a19623c6bf9640ebf59b *NAMESPACE
33650bbd97516e36f734399455520186 *NEWS
a494a7cc03e27b650819e1f609b494f7 *R/IBDCheck.R
57fc17ba6bcd208d2944e4f11cc54739 *R/IBDRemove.R
0fdd67fd55a1ecf78552108baaf38b04 *R/Inbreeding.R
69a0be850caf311d7442c8c836d77e75 *R/LoadVfile.R
f4b293e59afd0909f58dd6bc130b1620 *R/MissingRate.R
a7f57aec5e41358bbedcbdaf931a0688 *R/PCACheck.R
92a7f875e1307ecc6989d3fdec926b18 *R/RenderReport.R
6decbfd821cb9b7356bcb0a6369b0d02 *R/S4.R
7737408aedaad5062664104797e4b89f *R/SeqOpen.R
65268c8f7fbec3775ffddea09bb3eb9e *R/SeqSQC-package.R
da6ef94912fd3f94691b067fdee62e89 *R/SexCheck.R
ff42a2d143ce5d88939b15d58eb7927e *R/dataset_docum.R
b5a1ea146389d48d556b2a2a29458e6d *R/mergeGDS.R
705b75959d43ce62d9b2f0e9ac31c959 *R/plotIBD.R
30a32e6cbba4c0e5edd2c56b93a94e5c *R/plotInbreeding.R
c1819b98b8bfe1c9cdfe039f30d6dfc8 *R/plotMissingRate.R
8e79016b701848703e03449a62244890 *R/plotPop.R
3bc6f8d4f33938d56da6d725845c3ecd *R/plotQC.R
719c932e6dbb03d9ab180b30db9863c7 *R/plotQCData.R
1316271687fe06f3ebc8e70804505270 *R/plotSexCheck.R
e94adc79b7726cae11354cd3c6c2756c *R/problemList.R
75ef22fc34ff390814e6b186a9fe7393 *R/readgdsn.R
f0a31a4e65d8826c7a652ce8150baf07 *R/sampleQC.R
c05417bb6ffe571a195f12f15f2d95a2 *R/subsetGDS.R
025401b9d8b28beef626b4389aef1b63 *R/zzz.R
9b4da0619b57d6754a4dba4fe420393c *README.md
7116424422789a83852cae0e9e70b7a7 *build/vignette.rds
4be9f8c588924975176cfee41833a96a *inst/CITATION
b5c078903bca576a1c82adfebab50f87 *inst/doc/vignette.R
bba8fed514f619edd2f4e09f8bfaac2b *inst/doc/vignette.Rmd
def6f2934bf77f47676c946e0fbb5da3 *inst/doc/vignette.html
b00e346b1db4694cbd7a5d64b541a745 *inst/extdata/CCDS.Hs37.3.reduced_chr1.bed
b081d6d9c6928a65aa5274911ca5d7aa *inst/extdata/example.gds
5967338f09f5e1e31182f024583c8678 *inst/extdata/example.seqfile.Rdata
23ce88344dbc706a3fe6f51c8328628a *inst/extdata/example_sub.vcf
e882e03839052ea69384672446467a64 *inst/extdata/metadata.csv
7569616287c87205fb13e5b0235bc55c *inst/extdata/sampleAnnotation.txt
d6dc64aa4e92af7ea9e11eefa09352f7 *inst/extdata/sampleQCReport.Rmd
dc7604e696409652734ae6ec7da3542f *inst/script/make-metadata.R
0143adbd2206d52b0667fd1670756d28 *inst/todo.Rmd
a92c93862b6c631649392bd825476c24 *man/CCDS.Hs37.3.reduced_chr1.bed.Rd
2b47285c1e3bcefc4de655afa62e2f81 *man/IBDCheck.Rd
52ffff8c3f43d882d5ec4230080f83bf *man/IBDRemove.Rd
bb84c06fe21a664c9a03c99599e3c098 *man/Inbreeding.Rd
478557c75638982dedc372cc699574f9 *man/LoadVfile.Rd
c051a163caae9353e9068faa6b882d23 *man/MissingRate.Rd
e2662482415aef7e9de7abf78cee416e *man/PCACheck.Rd
a4bcdaa5d29df5f6c59c054e5f15e777 *man/RenderReport.Rd
8f655991ed9c68df71bf9cfea59df3b8 *man/SeqOpen.Rd
d6d84c9b5fb2444a8ddae50744a95bfc *man/SeqSQC-class.Rd
f30dad640f5b4955e7959b3c2258ee0a *man/SeqSQC-package.Rd
b4b4869c4f1713527721e0a7a5c2aeb9 *man/SexCheck.Rd
17a18f7bece478e03c68eaf9d43ad884 *man/example.gds.Rd
3e064cb097d3eaae918f8d33fde9539a *man/example.seqfile.Rdata.Rd
5eecdb54a743e8e3a526e2aeca83d974 *man/example_sub.vcf.Rd
3c57f4d4f308fb7e496b973a55dcd6ed *man/plotQC.Rd
20fa5cad2a17d75b1c0f08fdc0662787 *man/problemList.Rd
f8485becdeb23deab8d3e987fc82c561 *man/sampleAnnotation.txt.Rd
c780d72d2cf2e28636388a916a974176 *man/sampleQC.Rd
d01a0f787745d3eb5df936b03a7d923a *tests/testthat.R
29dd2e80c9ae31b26757cc9b68890d72 *tests/testthat/test_metaInput.R
bba8fed514f619edd2f4e09f8bfaac2b *vignettes/vignette.Rmd
