db5fb3997a09a4938d57e1105429c4a8 *DESCRIPTION
4a283c208290e8ed4143f2ea6cd8e792 *NAMESPACE
e30cd69565216ddb218916245fb639a2 *NEWS
865a4a80b73530e76c91c5fd1be16357 *R/AsiGraph.R
c29a34300e1c4a75a6365fcec1abc40d *R/BinGraph.R
d3c1d7f93b7517fc0815c17f440ddc4d *R/CheckAttributes.R
5c0d1c9cb2c9879a48b550362d9feb48 *R/Compactness.R
c9b531e542885cc2626f52c9fd8ae478 *R/ComputeWeightsInBins.R
686b3ac732b1bfaa371bdfb8258dcf25 *R/CreateGrid.R
972a56f2cb4c8a4575aaa5cb386e4944 *R/DistGraph.R
ec8e80bdbfdecd91711f0cbfd539ec2e *R/GraphDiffusion.R
e976af0fb65add863a9544155c5cbcdf *R/GraphMFPT.R
7d5dcca57316b79e7f7d1ddd1ad90514 *R/Knet.R
e39ac76004addba122e491fa47fe9b94 *R/Knode.R
ce084dc088d2bb5b6d7291756740dcc7 *R/Shuffle.R
b33553a51a2fd83605a09dcd7dc9ce4c *R/SpreadHits.R
58f7c611b9a6fae73e16fc5143114767 *R/plot.Knet.R
6129297fe577ee3329d9bbf47ed0eb2d *build/vignette.rds
f630de8c419f7ebf31756c38b54c7882 *data/datalist
6568e30a2ff36eace5655b52bcd42c80 *data/edgelist.humannet.RData
6b8ffa644f3f35413477ba0fe1a431d6 *data/edgelist.intact.RData
9f0ff1e426135d9b0053133bbf8a9730 *data/g.bandyopadhyay.treated.RData
0d10ab6583d53e580e17fa63112ede1d *data/g.bandyopadhyay.untreated.RData
a540ec81e0c5a0a4d836b4f9b260d726 *data/g.costanzo.cor.RData
db598922736840d5f8e4416d811dbddd *data/g.costanzo.raw.RData
258cdfe7110ce71c34a104dd573ef402 *data/g.srivas.high.RData
dd1278aa3ac6a091bbe36670bcb2bb66 *data/g.srivas.untreated.RData
07b6e72888d0c63551093c30f1574ca2 *data/go.entrez.RData
0812edfcd70083b76b8c74cf6f53c62f *data/rnai.cheung.RData
5beaaaab52e7eb4d2312de9017d1428c *inst/CITATION
fdf7a05b5cf9e56b395968d79b0f19df *inst/doc/SANTA-vignette.R
9d9236aac0540630f7f4984670812804 *inst/doc/SANTA-vignette.Rmd
aa66f1761a2e371e8a1e726c207c46fa *inst/doc/SANTA-vignette.html
cb74e8fe9eeb6056e72ecb37f93017bd *inst/unitTests/test_AsiGraph.R
2167bba88583ee521f3247b6c6b09b7c *inst/unitTests/test_BinGraph.R
4786f166f386c5465f221d64604b9616 *inst/unitTests/test_CheckAttributes.R
e41d8cfc0be9a8581f0de8acc08c5f5a *inst/unitTests/test_Compactness.R
0eff0215abea1db8c40f98bea60981c5 *inst/unitTests/test_ComputeWeightsInBins.R
0436f4f7808d14a787cc2070cda454a0 *inst/unitTests/test_CreateGrid.R
edbc06a4a2acd4271e2b4321bca9e5fa *inst/unitTests/test_DistGraph.R
45e368834d4cff0516e05d751f673d61 *inst/unitTests/test_GraphDiffusion.R
98c100a9b731a4f1020b1cf138c6f864 *inst/unitTests/test_GraphMFPT.R
9f6f53012c8112e981e3a27d9ea33067 *inst/unitTests/test_Knet.R
14b4ebead3e74f77c9d8ab3c99db6a90 *inst/unitTests/test_Knode.R
7bf4a28b68e1ae33a81dda42c56db2f9 *inst/unitTests/test_Shuffle.R
1319ec7f8bd53682134c6109fcf88eea *inst/unitTests/test_SpreadHits.R
e867754e4fe70b026b1fd26597de71b4 *man/BinGraph.Rd
79fb8be98f1158b5d58ea7d227c585ca *man/Compactness.Rd
982306b4c2b1d3d59f425bedb5c21df8 *man/CreateGrid.Rd
f2f06025a6e065b7f9a15b8739d84882 *man/DistGraph.Rd
811bfd8032d3987d31d60ef0ac2dbdb9 *man/GraphDiffusion.Rd
fb24b119b3c447788748777285d24ea8 *man/GraphMFPT.Rd
8265aa9640bc292a511249fbf42f6841 *man/Knet.Rd
86b603295d8520f8d1734005939807c0 *man/Knode.Rd
35b6adfbe260c2119885600a9cc6731a *man/SANTA.data.Rd
aa6ebed03cbaa70eb4cf9cdecdc70f24 *man/SpreadHits.Rd
5e03a195606d5391a0c52fe19cacd227 *man/plot.Knet.Rd
d4fb7af49b3da701f01f043e91d61e41 *src/computenetK_fewzeros.c
bf1c8d5c1a530ba9a96798bfb8bd6f17 *src/computenodeAUK.c
b278e33874c55a09252bb20dc9439e0d *src/computeweights.c
ddb5d079930749865304959d1a330040 *tests/runTests.R
9d9236aac0540630f7f4984670812804 *vignettes/SANTA-vignette.Rmd
e60fd473fc2a5c76502264f0c99e3ee5 *vignettes/fig_bionet_simulation.jpg
3cf3b41d06cdc48a5e8e0e0be3c7419d *vignettes/fig_case_3_association.jpg
e65599c4d4fc7a6c76b8eccd0c38dd00 *vignettes/fig_dna_1.jpg
48530b9cb06465a1a0454e9711ff11d4 *vignettes/fig_dna_2.jpg
