fc79bdd25bbde96c75c1e75a7b4b8e2c *DESCRIPTION
572abbde0cf0f75266673d8bc8d59273 *NAMESPACE
2995b1a1343bf03c1f9f39dd480badfc *NEWS.md
1ecfb2a262b1098a196036880b5d6a1d *R/RBPEqBind-package.R
e81e0b9bd887f4cea44adf8c1522bd41 *R/data_loading.R
7bc91f6b24cd93367fb0650f5c753f91 *R/equilibrium.R
902c86d30074f290ce846fb470a3688e *R/export.R
4af7ea098b7b16b5904e497624db4e60 *R/globals.R
e8e685cc5368830600073e59cf97aa03 *R/peaks.R
212c9aee346eb1cf62b4bd9fbb996fea *R/simulation.R
dbe1733a8a9f3fe2c0849a5dba6db440 *R/utils.R
75bb9e24ffc18516da26af87a74b5c17 *R/visualization.R
7906e4b9c88f6dae65c9b7adf05822de *README.md
7f18ec43779bdc9d7e67dfc9f47b07bd *build/vignette.rds
4993afb4595ff80ee3d0c671f7fb8a5e *inst/CITATION
f901347bd2fe8bce7bdcd42f4bfaf9eb *inst/doc/RBPEqBind-intro.R
472e41c79a0680add3f02ca816278542 *inst/doc/RBPEqBind-intro.Rmd
a7feeb4b35bb9a80c4769d3ab74a55cd *inst/doc/RBPEqBind-intro.html
ffd0706b39d382f2012534b52536609c *inst/extdata/model_RBP.csv
c586b4dbf48a0c039e08dbac2500cf71 *inst/extdata/test_transcripts.fa
f0be54e5b78a56eba570917c808c4628 *inst/scripts/get_extdata.R
f4f984086499a17e894f7a13d540f0b3 *man/RBPEqBind.Rd
f8023599c50ae01ce92b8c2db8b254af *man/callPeaks.Rd
7fa2699572477bf31441ef6ee615b4ef *man/exportBed.Rd
96bd2bd52bf341bc387cb512d63c53a1 *man/exportResults.Rd
4cf8f8eb688b235c0a5b3a06a5252532 *man/figures/logo.png
c320ba3aa82d29b98117b6c6ecd9b0cf *man/generateRNA.Rd
7ac7abebefc8bd9f7d9fb7d60ff5d6a4 *man/importResults.Rd
bc235c4448472b70e27d7d96bb1b37a1 *man/loadModel.Rd
4ee02986fa1b0476d1c4b59afa49a81a *man/makeSE.Rd
9be0433f70cfb064a839ad88ba4fcf6a *man/parseGenomicHeader.Rd
a1d016dbd9adce2c0691c62f594f9fba *man/plotBinding.Rd
9d88a997778fafa62fc60cabecb2b769 *man/plotGrid.Rd
da094b0c3ba1a10121d6a0c50257f028 *man/plotHeatmap.Rd
8884db0e27c520e15ff400679de455ad *man/setModel.Rd
bf4daa75031caabdfd9eeff5ff704207 *man/simulateBinding.Rd
95838eea0a9a055261ef736355ec37f5 *man/simulateBindingFasta.Rd
3450f67b2329b9db5bf3cec091db5f37 *man/simulateGrid.Rd
b0f59caa89fe51602eb9cb480145030e *man/simulateGridFasta.Rd
6b563ed33a093a6296538828d466f440 *man/viewModel.Rd
be6c35ba054fabc69c75d08309d34951 *tests/testthat.R
11071afd6ed2ff4f9053e04f580c5d96 *tests/testthat/_snaps/visualization/plotbinding-basic.svg
bdef6ba1ff3384419e66ce6ee02a10a8 *tests/testthat/_snaps/visualization/plotgrid-density.svg
010ba8e0b0d8a8bae9cd59711b697f78 *tests/testthat/_snaps/visualization/plotheatmap-basic.svg
949de670be5aa9fe382b49895a04f816 *tests/testthat/_snaps/visualization/viewmodel-kd.svg
d3930bace7d81ad4055217217f1f9edc *tests/testthat/_snaps/visualization/viewmodel-multirbp.svg
cc7aacefab9cf32341dd9ab5d17d7828 *tests/testthat/setup.R
602b6f5580072aee8e2bd326d3c13025 *tests/testthat/test-data_loading.R
49f3d5d7d7645106acc93b3c7c2600d2 *tests/testthat/test-equilibrium.R
2fd5f3ada1ea155e73928fceb5ddaccc *tests/testthat/test-export.R
a99b17c66a29e0fd6839ce921ac93961 *tests/testthat/test-peaks.R
525e84b93ed1adb402747372f434d6b3 *tests/testthat/test-simulation.R
32274a084ebfaacaa1b991c9d889bbff *tests/testthat/test-utils.R
9d3901f46fed8ad348fee078dc6e97a6 *tests/testthat/test-visualization.R
472e41c79a0680add3f02ca816278542 *vignettes/RBPEqBind-intro.Rmd
