3dda1d290f90d4a22caca9821353b772 *DESCRIPTION
c1126a3116c8aa1753b9a4f975ebbfb5 *NAMESPACE
6ae6f985fa68c9d74bf634c8da7e431c *NEWS.md
fe3b50496e39104fde5534b56191b9c1 *R/AIMS_functions.R
4a82b3d754e12bb79898859f1c3cae7a *R/BreastSubtypeR_methods.R
10dc39c65c2c4ce3861ca92f3477c283 *R/NC_functions.R
f8a2c427afdc4983084ca5628f85d0a0 *R/SSPBC_functions.R
189dcfc9993e9da97d04fb9c942230f1 *R/Utilities.R
718d15b841d798609df34734fa9d5225 *R/data_doc.R
3fca39e3c12381d32256105e6c5b820c *R/runShinyBreastSubtypeR.R
7e70dfcaab55439d05b5439d109a245b *R/zzz.R
3e81c53e4d34e37fbaeace74c628fd8c *README.md
90e989ef546fc43bf0148a272bcf7d59 *build/vignette.rds
6c541625fe22667540ef7c11d9005290 *data/AIMSmodel.RData
d2600fffe228ceec2e1a47b586747543 *data/BreastSubtypeRobj.RData
7418017d12bdff4b0a15149e25d52e4a *data/Gene.ID.ann.RData
32b39cceec5075f8eab246f9ac71aecb *data/OSLO2EMIT0obj.RData
5139e1f0a00cbd76d6869f2f8fbbbc4a *data/TCGABRCAobj.RData
d7a778b352c11ceff81657faefc3c558 *data/datalist
1c2ba126cc1ea8ecc15dd6dc4656285d *data/sspbc.models.RData
b7a063e7b505d468e3b8e9af9b785f82 *data/sspbc.models.fullname.RData
0d9a32ace311f33cb0ca921878683918 *inst/CITATION
f6817f108d0221a8bada145afa772378 *inst/RshinyTest/OSLO2EMIT0_GEX_log2.FPKM.txt
2fe6e743f8d95ecd25020869c5323f5e *inst/RshinyTest/OSLO2EMIT0_anno.txt
c099b3adc9a2350cc4b24bc523d3f6bd *inst/RshinyTest/OSLO2EMIT0_clinical.txt
9468024a31104b3c1268d3cdd57df734 *inst/RshinyTest/TCGABRCAsub_GEX_RawCounts.txt
5dd27135028dddddbabb40ae7909fd39 *inst/RshinyTest/TCGABRCAsub_anno.txt
76dc3e9b7a8848c2481685476915c7ae *inst/RshinyTest/TCGABRCAsub_clinical.txt
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44e0cdab0f2da60d0abfbd70244790e0 *inst/ShinyBreastSubtypeR/server.R
b69801ded430980af2a9539dfc064824 *inst/ShinyBreastSubtypeR/ui.R
a31ff81b06bbeef511d1a1af3645dfc6 *inst/doc/BreastSubtypeR.R
f0bfa1b0288ff9c217b49497149de90f *inst/doc/BreastSubtypeR.Rmd
0d016ae69b57b7e5a568c11d5ea6e48d *inst/doc/BreastSubtypeR.html
523ef725760c0ef2e0e2e2e1cc8c4937 *inst/rstudio/addins.dcf
2e24597b4a4b2d56d99c9ba38dea1299 *man/AIMSmodel.Rd
cd027dce582ab6303ffa96d99ebb4990 *man/BS_AIMS.Rd
d2e6b93ee733922599cabad059276d93 *man/BS_Multi.Rd
ada014873acf37e2955365b6d3fbebeb *man/BS_PCAPAM50.Rd
fb88d0888679d448a127b4bc32478fd9 *man/BS_cIHC.Rd
31289cceedb9839b5d51c33fe5160727 *man/BS_cIHC.itr.Rd
369e67eca61dfcb171bba619479618e9 *man/BS_parker.Rd
468d81b2820d1ee5ceda2dee38667225 *man/BS_ssBC.Rd
37aabb87fe663100d6b8a25fa6afd65b *man/BS_sspbc.Rd
12e8c878a5274517c0b7f2166afa2ba5 *man/BreastSubtypeR.Rd
ffcfdaa950ce89a600b326290ddd7c2b *man/BreastSubtypeRobj.Rd
b339337c87cae7a15f7b0b680fb823ec *man/Gene.ID.ann.Rd
b3458b5978b27362866d04e70249e190 *man/Mapping.Rd
78b24d59df25568e1d3523236c2ef14b *man/OSLO2EMIT0obj.Rd
10fa7efede6f704ebc3dcc848acf2df9 *man/TCGABRCAobj.Rd
2d91774f6df5c3cef0ac2e4800a2e7c5 *man/Vis_Multi.Rd
e8e59be353bbb55d723f2ffa878ab418 *man/Vis_PCA.Rd
0ac8785ee2c00fc808461dedbe599036 *man/Vis_boxplot.Rd
ddfff29ae6b53f49e16feba851e3d7fa *man/Vis_heatmap.Rd
0def83c1430d41a0f152479fec79b668 *man/Vis_pie.Rd
cd2de12ba5924c9f63d7c928b9b620b4 *man/iBreastSubtypeR.Rd
7eab68936aba8f8641c86d42288e0370 *man/sspbc.models.Rd
960507cb946a34ddf0da76b73bf226a6 *man/sspbc.models.fullname.Rd
4818475822f5e7c1aa2fb9226845e278 *tests/testthat.R
b94a7f7adb07248bbdadd4cea5890a07 *tests/testthat/test-auto-fixture-regression.R
b9d5e9b0e5f6a533783e98a1c36d993d *tests/testthat/test-auto-routing.R
6eea3208050cacd2da4d24a1ace11fcf *tests/testthat/test-auto-subsetting.R
752268b834ad0aff9bab2bf107a3b314 *tests/testthat/test-bs-multi-manual.R
15443cea6abe541e112fe611243db700 *tests/testthat/test-bs-multi-messages.R
e4c688386134a4fb8fe092cbf91de247 *tests/testthat/test-entropy.R
6b4424bec4eb1cf6fabe90cd89c0f7b5 *tests/testthat/test-er-balancing-errors.R
867ffdf57d64183148a526b62a904a1e *tests/testthat/test-mapping-robustness.R
586d7ca5760629bf49657bb0c0ddfb1f *tests/testthat/test-pcapam50-unknown-er.R
9280e3fc9f433732a9d1d48abaaa884a *tests/testthat/test-phenodata-normalization.R
0e9cbe431799f4f7484189f0400836fa *tests/testthat/test-ror-groups.R
4c8045849e22874e852f965e11fcd7ff *tests/testthat/test-shiny-launcher.R
35f3e4c1c10af58b1c8c85e1e3e770c7 *tests/testthat/test-shiny-preflight.R
1001a1c590495e66a1b700ce60f5261c *tests/testthat/test-tn-cohort-detection.R
f0bfa1b0288ff9c217b49497149de90f *vignettes/BreastSubtypeR.Rmd
