Package: ReportingTools
Title: Tools for making reports in various formats
Version: 2.53.0
Author: Jason A. Hackney, Melanie Huntley, Jessica L. Larson, Christina
        Chaivorapol, Gabriel Becker, and Josh Kaminker
Maintainer: Jason A. Hackney <hackney.jason@gene.com>, Gabriel Becker
 <becker.gabe@gene.com>, Jessica L. Larson
 <larson.jessica@gmail.com>
Depends: methods, knitr, utils
Imports: Biobase,hwriter,Category,GOstats,limma(>=
        3.17.5),lattice,AnnotationDbi,edgeR, annotate,PFAM.db,
        GSEABase, BiocGenerics(>= 0.1.6), grid, XML, R.utils, DESeq2(>=
        1.3.41), ggplot2, ggbio, IRanges
Suggests: RUnit, ALL, hgu95av2.db, org.Mm.eg.db, shiny, pasilla,
        org.Sc.sgd.db, rmarkdown, markdown
Type: Package
LazyLoad: yes
License: Artistic-2.0
Description: The ReportingTools software package enables users to
        easily display reports of analysis results generated from
        sources such as microarray and sequencing data.  The package
        allows users to create HTML pages that may be viewed on a web
        browser such as Safari, or in other formats readable by
        programs such as Excel.  Users can generate tables with
        sortable and filterable columns, make and display plots, and
        link table entries to other data sources such as NCBI or larger
        plots within the HTML page.  Using the package, users can also
        produce a table of contents page to link various reports
        together for a particular project that can be viewed in a web
        browser.  For more examples, please visit our site: http://
        research-pub.gene.com/ReportingTools.
ByteCompile: TRUE
VignetteBuilder: utils, rmarkdown
biocViews: ImmunoOncology, Software, Visualization, Microarray, RNASeq,
        GO, DataRepresentation, GeneSetEnrichment
Config/pak/sysreqs: cmake make libbz2-dev libicu-dev liblzma-dev
        libpng-dev libuv1-dev libxml2-dev libssl-dev xz-utils
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:36:54 UTC
RemoteUrl: https://github.com/bioc/ReportingTools
RemoteRef: HEAD
RemoteSha: fe3989bf31b879005ccd9ef359d4d2dab6aac78f
NeedsCompilation: no
Packaged: 2026-05-30 09:48:10 UTC; root
Built: R 4.6.0; ; 2026-05-30 10:31:10 UTC; windows
