Package: Polytect
Title: An R package for digital data clustering
Version: 1.5.0
Authors@R: 
    person("Yao", "Chen", , "emmachentar@live.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-8172-3996"))
Description: Polytect is an advanced computational tool designed for
        the analysis of multi-color digital PCR data. It provides
        automatic clustering and labeling of partitions into distinct
        groups based on clusters first identified by the flowPeaks
        algorithm. Polytect is particularly useful for researchers in
        molecular biology and bioinformatics, enabling them to gain
        deeper insights into their experimental results through precise
        partition classification and data visualization.
biocViews: ddPCR, Clustering, MultiChannel, Classification
License: Artistic-2.0
URL: https://github.com/emmachenlingo/Polytect
BugReports: https://github.com/emmachenlingo/Polytect/issues
Encoding: UTF-8
LazyData: false
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends: R (>= 4.4.0)
Imports: stats, utils, grDevices, mvtnorm, sn, dplyr, flowPeaks,
        ggplot2, tidyverse, cowplot, mlrMBO, DiceKriging, smoof,
        ParamHelpers, lhs, rgenoud, BiocManager
Suggests: testthat (>= 3.0.0), knitr, rmarkdown, ddPCRclust
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/pak/sysreqs: cmake libfontconfig1-dev libfreetype6-dev
        libfribidi-dev libgdal-dev gdal-bin libgeos-dev
        libglu1-mesa-dev libgmp3-dev make libgsl0-dev libharfbuzz-dev
        jags libicu-dev libjpeg-dev libpng-dev libtiff-dev libuv1-dev
        libwebp-dev libxml2-dev libmpfr-dev libopenmpi-dev libssl-dev
        libproj-dev libx11-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 13:04:08 UTC
RemoteUrl: https://github.com/bioc/Polytect
RemoteRef: HEAD
RemoteSha: 48dacdd5c28012320783eaacc5393c42e200652a
NeedsCompilation: no
Packaged: 2026-05-30 07:06:45 UTC; root
Author: Yao Chen [aut, cre] (ORCID: <https://orcid.org/0000-0001-8172-3996>)
Maintainer: Yao Chen <emmachentar@live.com>
Built: R 4.6.0; ; 2026-05-30 07:08:52 UTC; windows
