GenomicDataCommons-package
                        GenomicDataCommons: A package for interfacing
                        with the NCI GDC
aggregations            aggregations
available_expand        Return valid values for "expand"
available_fields        S3 Generic to return all GDC fields
available_values        Find common values for a GDC field
count                   provide count of records in a 'GDCQuery'
default_fields          S3 Generic to return default GDC fields
entity_name             Get the entity name from a GDCQuery object
expand                  Set the 'expand' parameter
facet                   Set facets for a 'GDCQuery'
field_description       S3 Generic that returns the field description
                        text, if available
filtering               Manipulating GDCQuery filters
gdc_cache               Work with gdc cache directory
gdc_client              return gdc-client executable path
gdc_clinical            Get clinical information from GDC
gdc_token               return a gdc token from file or environment
gdcdata                 Download GDC files
grep_fields             Find matching field names
id_field                get the name of the id field
ids                     Get the ids associated with a GDC query or
                        response
make_filter             Create NCI GDC filters for limiting GDC query
                        results
manifest                Prepare GDC manifest file for bulk download
mapping                 Query GDC for available endpoint fields
query                   Start a query of GDC metadata
readDNAcopy             Read DNAcopy results into GRanges object
readHTSeqFile           Read a single htseq-counts result file.
response                Fetch 'GDCQuery' metadata from GDC
results                 results
results_all             results_all
select                  S3 generic to set GDCQuery fields
slicing                 Query GDC for data slices
status                  Query the GDC for current status
transfer                Bulk data download
write_manifest          write a manifest data.frame to disk
