filtered                A GenomicRangesList object used as an example
                        in the GOTHiC package
GOTHiC                  Genome Organisation Through HiC
GOTHiChicup             Genome Organisation Through HiC from HiCUP
                        output
mapReadsToRestrictionSites
                        Function to map aligned and paired reads to the
                        restriction fragments
pairReads               Function pairs aligned paired NGS reads
