RNA-Binding Protein Competitive Binding Simulation

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Documentation for package ‘RBPEqBind’ version 0.99.4

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS
• Package README

Help Pages

callPeaks	Call Peaks from Binding Simulation
exportBed	Export BED format
exportResults	Export Results
generateRNA	Generate Random RNA Sequence
importResults	Import Results
loadModel	Load RBP Model from CSV
makeSE	Create SummarizedExperiment from Results
parseGenomicHeader	Parse Genomic Coordinates from FASTA Header
plotBinding	Plot Binding Profile
plotGrid	Plot Competition Grid
plotHeatmap	Plot Binding Heatmap
setModel	Set Model Affinity (Score to Kd Conversion)
simulateBinding	Simulate Competitive Binding
simulateBindingFasta	Simulate Binding from FASTA File(s)
simulateGrid	Simulate Concentration Grid
simulateGridFasta	Simulate Grid from FASTA File(s)
viewModel	View Model Affinity Distributions