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msqc1

This is the development version of msqc1; for the stable release version, see msqc1.

Sigma mix MSQC1 data


Bioconductor version: Development (3.20)

contains eight technical replicate data set and a three replicate dilution series of the MS Qual/Quant Quality Control Mix standard sample (Sigma-Aldrich, Buchs, Switzerland) measured on five different mass spectrometer platforms at the Functional Genomics Center Zurich.

Author: Tobias Kockmann [aut] , Christian Trachsel [aut], Christian Panse [aut, cre]

Maintainer: Christian Panse <cp at fgcz.ethz.ch>

Citation (from within R, enter citation("msqc1")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("msqc1")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("msqc1")
ASMS 2016 poster (in portrait) abstract ID number: 282492 PDF R Script
Introducing msqc1 - A Mass Spec Data set for Targeted Proteomics Performance Evaluation HTML R Script
LC Observations - Retention Time Stability HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, MassSpectrometryData, ReproducibleResearch
Version 1.33.0
License GPL
Depends R (>= 3.6), lattice, stats, utils
Imports
System Requirements
URL https://panoramaweb.org/labkey/MSQC1.url http://fgcz-bfabric.uzh.ch/bfabric/project.html?projectId=1959
See More
Suggests BiocStyle, knitr, rmarkdown, testthat, specL(>= 1.2)
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package msqc1_1.33.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/msqc1
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/msqc1
Package Short Url https://bioconductor.org/packages/msqc1/
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