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curatedCRCData

This is the development version of curatedCRCData; for the stable release version, see curatedCRCData.

Colorectal Cancer Gene Expression Analysis


Bioconductor version: Development (3.20)

The curatedCRC package provides relevant functions and data for gene expression analysis in patients with colorectal cancer.

Author: Princy Parsana, Markus Riester, Curtis Huttenhower, Levi Waldron

Maintainer: Princy Parsana <princyparsana at jhu.edu>

Citation (from within R, enter citation("curatedCRCData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("curatedCRCData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews Cancer, Colorectal, ExperimentData, RNAExpressionData, TCGA
Version 2.37.0
License Artistic-2.0
Depends R (>= 2.10.0), nlme
Imports BiocGenerics
System Requirements
URL https://bitbucket.org/biobakery/curatedcrcdata
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Suggests survival, RUnit, metafor, genefilter, logging, sva, xtable, futile.logger, BiocStyle
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/curatedCRCData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/curatedCRCData
Package Short Url https://bioconductor.org/packages/curatedCRCData/
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