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cMap2data

This is the development version of cMap2data; for the stable release version, see cMap2data.

Connectivity Map (version 2) Data


Bioconductor version: Development (3.20)

Data package which provides default drug profiles for the DrugVsDisease package as well as associated gene lists and data clusters used by the DrugVsDisease package.

Author: C. Pacini

Maintainer: J. Saez-Rodriguez <saezrodriguez at ebi.ac.uk>

Citation (from within R, enter citation("cMap2data")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("cMap2data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cMap2data")
cMap2data PDF R Script
Reference Manual PDF

Details

biocViews ExperimentData, GEO, Homo_sapiens_Data, MicroarrayData
Version 1.41.0
License GPL-3
Depends R (>= 2.10)
Imports
System Requirements
URL
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Suggests
Linking To
Enhances
Depends On Me DrugVsDisease
Imports Me
Suggests Me
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package cMap2data_1.41.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/cMap2data
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/cMap2data
Package Short Url https://bioconductor.org/packages/cMap2data/
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