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TBX20BamSubset

This is the development version of TBX20BamSubset; for the stable release version, see TBX20BamSubset.

Subset of BAM files from the "TBX20" experiment


Bioconductor version: Development (3.20)

Dual transcriptional activator and repressor roles of TBX20 regulate adult cardiac structure and function. A subset of the RNA-Seq data.

Author: D. Bindreither

Maintainer: D. Bindreither <daniel.bindreither at gmail.com>

Citation (from within R, enter citation("TBX20BamSubset")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("TBX20BamSubset")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TBX20BamSubset")
TBX20 RNA-Seq data subset PDF R Script
Reference Manual PDF

Details

biocViews ExperimentData, RNASeqData, SequencingData
Version 1.41.0
License LGPL
Depends Rsamtools(>= 1.9.8)
Imports xtable
System Requirements
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Suggests
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Depends On Me
Imports Me Rmmquant
Suggests Me APAlyzer, magpie
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TBX20BamSubset_1.41.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/TBX20BamSubset
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TBX20BamSubset
Package Short Url https://bioconductor.org/packages/TBX20BamSubset/
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