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RnaSeqSampleSizeData

This is the development version of RnaSeqSampleSizeData; for the stable release version, see RnaSeqSampleSizeData.

RnaSeqSampleSizeData


Bioconductor version: Development (3.20)

RnaSeqSampleSizeData package provides the read counts and dispersion distribution from real RNA-seq experiments. It can be used by RnaSeqSampleSize package to estimate sample size and power for RNA-seq experiment design.

Author: Shilin Zhao, Chung-I Li, Yan Guo, Quanhu Sheng, Yu Shyr

Maintainer: Shilin Zhao <zhaoshilin at gmail.com>

Citation (from within R, enter citation("RnaSeqSampleSizeData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("RnaSeqSampleSizeData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RnaSeqSampleSizeData")
RnaSeqSampleSizeData: Read counts and dispersion distribution from real data for sample size estimation of RNA-seq experiments PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews CancerData, ExperimentData, RNASeqData
Version 1.37.0
License GPL (>= 2)
Depends edgeR, R (>= 2.10)
Imports
System Requirements
URL
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Suggests BiocStyle, knitr
Linking To
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Depends On Me RnaSeqSampleSize
Imports Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RnaSeqSampleSizeData_1.37.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/RnaSeqSampleSizeData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RnaSeqSampleSizeData
Package Short Url https://bioconductor.org/packages/RnaSeqSampleSizeData/
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