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This is the development version of KEGGdzPathwaysGEO; for the stable release version, see KEGGdzPathwaysGEO.

KEGG Disease Datasets from GEO

Bioconductor version: Development (3.20)

This is a collection of 24 data sets for which the phenotype is a disease with a corresponding pathway in the KEGG database.This collection of datasets were used as gold standard in comparing gene set analysis methods by the PADOG package.

Author: Gaurav Bhatti, Adi L. Tarca

Maintainer: Gaurav Bhatti <gbhatti at>

Citation (from within R, enter citation("KEGGdzPathwaysGEO")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


Reference Manual PDF


biocViews ExperimentData, GEO, MicroarrayData
Version 1.43.0
License GPL-2
Depends R (>= 2.13.0)
Imports Biobase, BiocGenerics
System Requirements
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Depends On Me PADOG
Imports Me GSEABenchmarkeR
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Follow Installation instructions to use this package in your R session.

Source Package KEGGdzPathwaysGEO_1.43.0.tar.gz
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