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FANTOM3and4CAGE

This is the development version of FANTOM3and4CAGE; for the stable release version, see FANTOM3and4CAGE.

CAGE data from FANTOM3 and FANTOM4 projects


Bioconductor version: Development (3.20)

CAGE (Cap Analysis Gene Expression) data from FANTOM3 and FANTOM4 projects produced by RIKEN Omics Science Center.

Author: Vanja Haberle, Department of Biology, University of Bergen, Norway <vanja.haberle at bio.uib.no>

Maintainer: Vanja Haberle <vanja.haberle at bio.uib.no>

Citation (from within R, enter citation("FANTOM3and4CAGE")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("FANTOM3and4CAGE")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FANTOM3and4CAGE")
FANTOM3and4CAGE PDF R Script
Reference Manual PDF

Details

biocViews ExperimentData, Tissue
Version 1.41.0
License GPL-3
Depends R (>= 2.15.0)
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me CAGEr
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package FANTOM3and4CAGE_1.41.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/FANTOM3and4CAGE
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/FANTOM3and4CAGE
Package Short Url https://bioconductor.org/packages/FANTOM3and4CAGE/
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