% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/tanggle.R
\docType{package}
\name{tanggle-package}
\alias{tanggle}
\alias{tanggle-package}
\title{tanggle: Visualization of Phylogenetic Networks}
\description{
\if{html}{\figure{logo.png}{options: style='float: right' alt='logo' width='120'}}

Offers functions for plotting split (or implicit) networks (unrooted, undirected) and explicit networks (rooted, directed) with reticulations extending. 'ggtree' and using functions from 'ape' and 'phangorn'. It extends the 'ggtree' package [@Yu2017] to allow the visualization of phylogenetic networks using the 'ggplot2' syntax. It offers an alternative to the plot functions already available in 'ape' Paradis and Schliep (2019) \doi{10.1093/bioinformatics/bty633} and 'phangorn' Schliep (2011) \doi{10.1093/bioinformatics/btq706}.
}
\seealso{
Useful links:
\itemize{
  \item \url{https://klausvigo.github.io/tanggle/}
  \item \url{https://github.com/KlausVigo/tanggle}
  \item Report bugs at \url{https://github.com/KlausVigo/tanggle/issues}
}

}
\author{
\strong{Maintainer}: Klaus Schliep \email{klaus.schliep@gmail.com} (\href{https://orcid.org/0000-0003-2941-0161}{ORCID})

Authors:
\itemize{
  \item Marta Vidal-Garcia
  \item Claudia Solis-Lemus \email{solislemus@wisc.edu} (\href{https://orcid.org/0000-0002-9789-8915}{ORCID})
  \item Leann Biancani
  \item Eren Ada
  \item L. Francisco Henao Diaz
  \item Joshua Justison
}

Other contributors:
\itemize{
  \item Guangchuang Yu [contributor]
}

}
\keyword{internal}
