e8e440dbcbdc427561e2dc42ce5493b7 *DESCRIPTION
d14d1ce9868365228e392ebe9f6a6b3a *NAMESPACE
e04b6b47a908cf993cf1572d5016bdef *R/AllClasses.R
7ab39a2129659e1c1474ddc508a660f5 *R/AllGenerics.R
3eb7e813d27ef6640e045b06cfb4577b *R/SCESet-methods.R
40419fc92ef5a4d936b43b5e70029915 *R/SingleCellExperiment-methods.R
4b834e95a85b6b7eb2b2999778a1b273 *R/annotateBMFeatures.R
5d2ed811248cb2ece961dec376fece85 *R/categoricalHlines.R
1561916192f0fae7861b80bfa4d5307a *R/defunct.R
8bcc0e8670d86584bd58d2e438faaf00 *R/getExplanatoryPCs.R
b927574e66c82f461aa2f86e417a397d *R/getVarianceExplained.R
2a43b06f7d511fb6b8d63393939ad813 *R/ggsce.R
d92d9f7d3215eeaccd9fecae63b148c5 *R/nexprs.R
a4c20f8e61a4ae01a5677dac8842b099 *R/plotColData.R
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9b50939c273f8855369abc0425616f4e *R/plotExplanatoryPCs.R
c8f07cd072a79db7e98fd9e2d051d95b *R/plotExplanatoryVariables.R
9aaa9177987fa21d68312ff6d41cdaa1 *R/plotExpression.R
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4ada3e8f0905e05603c18fce9f9c5d86 *R/plotHighestExprs.R
2b01f1ac8162f0963064de42e39a33c3 *R/plotPlatePosition.R
c929c01547a7d7f93402d2d09d60dda3 *R/plotRLE.R
2007d355c4e79c99a592e4d61a8404de *R/plotReducedDim.R
fbb2e4fb26a739500d62be66fab54f62 *R/plotRowData.R
34019242c8a66726058f252a0ffb14b3 *R/plotScater.R
e7c90c85038c04ab6c43c8a335f50e2b *R/plotXY.R
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960b352e3c96025c96d7177ebbb7b739 *R/plot_reddim.R
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2b00f6954469b52a2c29069a4c7345b5 *R/retrieveCellInfo.R
05496c27a0abb4bdde21cdc517928c6e *R/retrieveFeatureInfo.R
5008490068afe52cbb939a4fc9f09238 *R/runColDataPCA.R
5789eda2e28c801abdc7f918311e4fd4 *R/runMDS.R
62f7e7c3f2623bb18144607791b60b78 *R/runMultiUMAP.R
fef501a6000897e5008c9406eb196450 *R/runNMF.R
4675f3d6dace9e0a9921b006fef58d55 *R/runPCA.R
9e9e724e7b1d22c2a809b5ebae66f6a0 *R/runTSNE.R
be1821d219032b30a1f4398f0c923dee *R/runUMAP.R
057204fb0796a7d8ebe9277acb937431 *R/scater-pkg.R
1905dc1bc011fbc8e63fad2fc5927bbb *R/utils_plotting.R
0ad4353837c44731a19c306180a9f773 *R/utils_reddim.R
ecdb006102bf1bd7e091de130b201455 *build/vignette.rds
4a45c71799006d8754b805cda43ab5a6 *inst/CITATION
56df1f9167697f6342b9cc61d0e8d872 *inst/NEWS.Rd
b8357d7c67b06cd5a65b040667f76b15 *inst/doc/overview.R
92b2562224c9fa27ad9f3f4fc4d42a83 *inst/doc/overview.Rmd
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24b51de8008256260c02d4a930b75299 *man/annotateBMFeatures.Rd
eb5db7b5fbc2c25e0ceaed2c6674f008 *man/bootstraps.Rd
8ea09a6f2b50076931a7f13dd851f37e *man/categoricalHlines.Rd
05439340a535194e24f0bb99f6244410 *man/defunct.Rd
609e8e07aa12586ef6ad29e048b17f70 *man/getExplanatoryPCs.Rd
013031acf3014abe722014ec7d5a9019 *man/getVarianceExplained.Rd
3f223f5d867c6272cbb029b7a452773b *man/ggsce.Rd
8b23480997aa4da8dea6f5cd2280cf74 *man/nexprs.Rd
e89f102a7b45b291129f2225e0ad853b *man/plotColData.Rd
c5f63788f573f9f14f6eadeb479c5fce *man/plotDots.Rd
ed17bf9a867782e683db5f7faebcee17 *man/plotExplanatoryPCs.Rd
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86bca9ada5cbc552000f798ee82152bf *man/plotExpression.Rd
88fd6508f99c9c42ee7a428bfa744feb *man/plotGroupedHeatmap.Rd
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acf15579fb25c54b886814ae551c04ca *man/plotHighestExprs.Rd
9558af83ab8b7d5d5b487caf343f0f41 *man/plotPlatePosition.Rd
c974e521bd9de326b5ed297bb47f3286 *man/plotRLE.Rd
6fdf06a15309e850e451d7177eca0ca3 *man/plotReducedDim.Rd
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5022f8bef48de0712196221f26e17b04 *man/plotScater.Rd
c5005efa529bbc1f0e0166a5a6fd4825 *man/plotXY.Rd
3fa0b1368b1076e2a34ec8c2d355984e *man/plot_reddim.Rd
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0e63987fa67b985bc2e3466f1ee0a818 *man/retrieveCellInfo.Rd
89bb29fbb40bb9d5ca94fce7436eba5a *man/retrieveFeatureInfo.Rd
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11c7e77a0840a757704d4081fa36593c *man/runMDS.Rd
51765131811ce8cd841f0a1577ded142 *man/runMultiUMAP.Rd
bc1103e4fb21773abb1b8510f0fea33a *man/runNMF.Rd
778721ebfb0711fee064a0a75c060511 *man/runPCA.Rd
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19c41899cf426cfb7ba46a10a35c8fee *man/runUMAP.Rd
817c4a5fa686891309b0b888b66f10d8 *man/scater-pkg.Rd
9dcd8994923da2b3d1d358f155dd8d1a *man/scater-plot-args.Rd
1c11648141b04ad1a90dda53ee9dea33 *man/toSingleCellExperiment.Rd
a76bb1c7f8f6fee3b5791fc1a04033f7 *tests/testthat.R
993fb721fb606cf631b8a40de41ad922 *tests/testthat/setup.R
9b86b33ea6db03cc20ead89740e63e33 *tests/testthat/test-SingleCellExperiment-methods.R
011890ad1f9320482a57747151ca0453 *tests/testthat/test-expl-var.R
d0f1285bce9b7b5150b0400aa9711e74 *tests/testthat/test-nexprs.R
2e76da89f1414bd7d2db6979fd0f4a65 *tests/testthat/test-plot-dimred.R
e46d4e7dd605ce1a8907d453ec12a132 *tests/testthat/test-plot-exprs.R
7c5268450f3189a1db4ed46ec6600b89 *tests/testthat/test-plot-heat.R
a419196e06be4940d5dc15b3cf57ad9d *tests/testthat/test-plot-other.R
f52aba98b07995d0639bbf69c869b33b *tests/testthat/test-plot-scater.R
d8ede3c4bab1db04490417e417aff00b *tests/testthat/test-plot-utils.R
067e85c1102523ce92ccb431501a0667 *tests/testthat/test-qc-plot.R
a169001b9b91137de71ee79ad02aaa43 *tests/testthat/test-red-dim.R
92b2562224c9fa27ad9f3f4fc4d42a83 *vignettes/overview.Rmd
