Visualize the slide mimicking the original scan image using a 2d plot. — visualize_slide_2d • protGear

# Visualize the slide mimicking the original scan image using a 2d plot.

Source: `R/read_files_functions.R`
`visualize_slide_2d.Rd`

Visualize the slide mimicking the original scan image using a 2d plot.

    visualize_slide_2d(infile, MFI_var, d_f = NA)

## Arguments

infile

  - a .gpr file to be used to visualize the expression intensities of the slide spots

MFI_var

  the MFI variable to plot, can be either the background or foreground value

d_f

  a data frame with array data

## Value

A 2d plot of either the background or foreground values

## Examples

    ## Not run:
    visualize_slide_2d(
    infile = system.file("extdata", "/array_data/machine1/KK2-06.txt",
    package="protGear"),
    MFI_var = "B635 Median"
    )

    ## End(Not run)