10e7e9c25c140d74647740501938a2a9 *DESCRIPTION
ce08d832d9b2e092cab523dfb5ef31fd *NAMESPACE
1235acf7b2d69972150189eccf2c4e4e *NEWS
323de42250b55df9250080e45d9a2eac *R/check_input.R
f9149125a7f70f2c52e8c2cbe72b551b *R/data.R
5d1508a79a9ea9e9a0f358ecf62f1727 *R/exported.R
0420e9a60004712e75d787b0e56c25bb *R/general.R
c6bdfa4a08819c664c8355d6542dc0d6 *R/phasing.R
7bfb04b6e01131cc97b67faf87225434 *build/vignette.rds
d14bd0652c2cc4312c369d8970a0ffcd *data/GR_GENE_MODEL.rda
d1238640f8c33f356eefb6d64e7d3d9e *data/GR_GERM_SMALL_VARS.rda
a00e870bdeb60f93de00fecba9e4dd01 *data/GR_HAPLOBLOCKS.rda
e9d986edde2b73e69a937d992423ec46 *data/GR_SCNA.rda
a00b6cc25ccc0e15bb7358ab7f55281d *data/GR_SOM_SMALL_VARS.rda
15c90adf4e4fa843f5d58016534ee649 *inst/CITATION
73eca032d410b8052c66eba94277d75a *inst/doc/Usage.R
168d607553a5980ce473d1b52c074261 *inst/doc/Usage.Rmd
b9d20c0625d2e4185b98096a4a2ff4b4 *inst/doc/Usage.html
68f4f0e5934f0843a942abfe7c8d5ecf *inst/extdata/ZP_example.bam
afa50dc3d5e2279fe57d754d298bd343 *inst/extdata/ZP_example.bam.bai
04c19e04f00d0ce8b6a7bbc980317e89 *inst/extdata/ZP_example_chr7.vcf.gz
f250e5732075f0ab23b79b1e3688e600 *inst/extdata/ZP_example_chr7.vcf.gz.tbi
5c637e7636801ff38943b1d0cdc22987 *inst/tests/unit_tests.R
0ae3c06c2e528c33749714f9f1a74c43 *man/GR_GENE_MODEL.Rd
51b75ca6aa47bdffcbc4f13623375253 *man/GR_GERM_SMALL_VARS.Rd
72d334a71d3b58ec778da231be59fa44 *man/GR_HAPLOBLOCKS.Rd
8564984315c32c0d74cf588ae3c0d5d3 *man/GR_SCNA.Rd
1e8adcdc9ebcdb2fa84707a8b37da7c1 *man/GR_SOM_SMALL_VARS.Rd
160cc3030b75b5614e955733fedbf63c *man/ZP_ov.Rd
4130cf3967dd60421e49883ce463f1d3 *man/aff_germ_copies.Rd
da2cf77e6715d403d36977458c42f5f5 *man/aff_som_copies.Rd
07f07b3a628b1401ffda22030cc08445 *man/gene_ov.Rd
4f30e86f224ba38b5352d2b53d139781 *man/predict_per_variant.Rd
0bbb35534cb3b5377b0125448673fcaf *man/predict_zygosity.Rd
168d607553a5980ce473d1b52c074261 *vignettes/Usage.Rmd
