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This is the development version of gmoviz; for the stable release version, see gmoviz.

Seamless visualization of complex genomic variations in GMOs and edited cell lines

Bioconductor version: Development (3.20)

Genetically modified organisms (GMOs) and cell lines are widely used models in all kinds of biological research. As part of characterising these models, DNA sequencing technology and bioinformatics analyses are used systematically to study their genomes. Therefore, large volumes of data are generated and various algorithms are applied to analyse this data, which introduces a challenge on representing all findings in an informative and concise manner. `gmoviz` provides users with an easy way to visualise and facilitate the explanation of complex genomic editing events on a larger, biologically-relevant scale.

Author: Kathleen Zeglinski [cre, aut], Arthur Hsu [aut], Monther Alhamdoosh [aut] , Constantinos Koutsakis [aut]

Maintainer: Kathleen Zeglinski <kathleen.zeglinski at>

Citation (from within R, enter citation("gmoviz")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Advanced usage of gmoviz HTML R Script
Introduction to gmoviz HTML R Script
Reference Manual PDF


biocViews Coverage, GeneticVariability, GenomicVariation, Sequencing, Software, Visualization
Version 1.17.0
In Bioconductor since BioC 3.11 (R-4.0) (4 years)
License GPL-3
Depends circlize, GenomicRanges, graphics, R (>= 4.0)
Imports grid, gridBase, Rsamtools, ComplexHeatmap, BiocGenerics, Biostrings, GenomeInfoDb, methods, GenomicAlignments, GenomicFeatures, IRanges, rtracklayer, pracma, colorspace, S4Vectors
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Suggests testthat, knitr, rmarkdown, pasillaBamSubset, BiocStyle, BiocManager
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Follow Installation instructions to use this package in your R session.

Source Package gmoviz_1.17.0.tar.gz
Windows Binary
macOS Binary (x86_64) gmoviz_1.17.0.tgz
macOS Binary (arm64) gmoviz_1.17.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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