Registration Open for Bioc2024 July 24-26


This is the development version of PanViz; for the stable release version, see PanViz.

Integrating Multi-Omic Network Data With Summay-Level GWAS Data

Bioconductor version: Development (3.20)

This pacakge integrates data from the Kyoto Encyclopedia of Genes and Genomes (KEGG) with summary-level genome-wide association (GWAS) data, such as that provided by the GWAS Catalog or GWAS Central databases, or a user's own study or dataset, in order to produce biological networks, termed IMONs (Integrated Multi-Omic Networks). IMONs can be used to analyse trait-specific polymorphic data within the context of biochemical and metabolic reaction networks, providing greater biological interpretability for GWAS data.

Author: Luca Anholt [cre, aut]

Maintainer: Luca Anholt <la1317 at>

Citation (from within R, enter citation("PanViz")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

PanViz HTML R Script
Reference Manual PDF


biocViews GenomeWideAssociation, GraphAndNetwork, KEGG, Metabolomics, Network, Reactome, SNP, Software
Version 1.7.0
In Bioconductor since BioC 3.16 (R-4.2) (1.5 years)
License Artistic-2.0
Depends R (>= 4.2.0)
Imports tidyr, stringr, dplyr, tibble, magrittr, futile.logger, utils, easycsv, rentrez, igraph, RColorBrewer, data.table, colorspace, grDevices, rlang, methods
System Requirements
Bug Reports
See More
Suggests testthat (>= 3.0.0), BiocStyle, knitr, rmarkdown, networkD3
Linking To
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package PanViz_1.7.0.tar.gz
Windows Binary
macOS Binary (x86_64) PanViz_1.7.0.tgz
macOS Binary (arm64) PanViz_1.7.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
Bioc Package Browser
Package Short Url
Package Downloads Report Download Stats