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MAIT

This is the development version of MAIT; for the stable release version, see MAIT.

Statistical Analysis of Metabolomic Data


Bioconductor version: Development (3.20)

The MAIT package contains functions to perform end-to-end statistical analysis of LC/MS Metabolomic Data. Special emphasis is put on peak annotation and in modular function design of the functions.

Author: Francesc Fernandez-Albert, Rafael Llorach, Cristina Andres-LaCueva, Alexandre Perera

Maintainer: Pol Sola-Santos <pol.soladelossantos at gmail.com>

Citation (from within R, enter citation("MAIT")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("MAIT")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MAIT")
\maketitleMAIT Vignette PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version 1.39.0
In Bioconductor since BioC 3.0 (R-3.1) (9.5 years)
License GPL-2
Depends R (>= 2.10), CAMERA, Rcpp, pls
Imports gplots, e1071, class, MASS, plsgenomics, agricolae, xcms, methods, caret
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MAIT_1.39.0.tar.gz
Windows Binary MAIT_1.39.0.zip
macOS Binary (x86_64) MAIT_1.39.0.tgz
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/MAIT
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MAIT
Bioc Package Browser https://code.bioconductor.org/browse/MAIT/
Package Short Url https://bioconductor.org/packages/MAIT/
Package Downloads Report Download Stats