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This is the development version of ClusterJudge; for the stable release version, see ClusterJudge.

Judging Quality of Clustering Methods using Mutual Information

Bioconductor version: Development (3.20)

ClusterJudge implements the functions, examples and other software published as an algorithm by Gibbons, FD and Roth FP. The article is called "Judging the Quality of Gene Expression-Based Clustering Methods Using Gene Annotation" and it appeared in Genome Research, vol. 12, pp1574-1581 (2002). See package?ClusterJudge for an overview.

Author: Adrian Pasculescu

Maintainer: Adrian Pasculescu <a.pasculescu at>

Citation (from within R, enter citation("ClusterJudge")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

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Reference Manual PDF


biocViews Clustering, GO, GeneExpression, Software, StatisticalMethod
Version 1.27.0
In Bioconductor since BioC 3.6 (R-3.4) (6.5 years)
License Artistic-2.0
Depends R (>= 3.6), stats, utils, graphics, infotheo, lattice, latticeExtra, httr, jsonlite
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Suggests yeastExpData, knitr, rmarkdown, devtools, testthat, biomaRt
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Source Package ClusterJudge_1.27.0.tar.gz
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