Package: trio
Type: Package
Title: Testing of SNPs and SNP Interactions in Case-Parent Trio Studies
Version: 3.51.0
Date: 2026-04-06
Author: Holger Schwender, Qing Li, Philipp Berger, Christoph Neumann,
        Margaret Taub, Ingo Ruczinski
Maintainer: Holger Schwender <holger.schw@gmx.de>
Depends: R (>= 3.0.1)
Suggests: mcbiopi, splines, logicFS (>= 1.28.1), KernSmooth,
        VariantAnnotation
Imports: grDevices, graphics, methods, stats, survival, utils,
        siggenes, LogicReg (>= 1.6.1), data.table
Description: Testing SNPs and SNP interactions with a genotypic TDT.
        This package furthermore contains functions for computing
        pairwise values of LD measures and for identifying LD blocks,
        as well as functions for setting up matched case pseudo-control
        genotype data for case-parent trios in order to run trio logic
        regression, for imputing missing genotypes in trios, for
        simulating case-parent trios with disease risk dependent on SNP
        interaction, and for power and sample size calculation in trio
        data.
License: LGPL-2
biocViews: SNP, GeneticVariability, Microarray, Genetics
RoxygenNote: 7.3.3
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:38:03 UTC
RemoteUrl: https://github.com/bioc/trio
RemoteRef: HEAD
RemoteSha: bbc40abba11ed39384d63550927d9d4a06e51ca4
NeedsCompilation: no
Packaged: 2026-05-21 11:02:38 UTC; root
Built: R 4.6.0; ; 2026-05-21 11:04:33 UTC; windows
