Type: Package
Package: tidySpatialExperiment
Title: SpatialExperiment with tidy principles
Version: 1.9.0
Authors@R: c(
    person("William", "Hutchison", email = "hutchison.w@wehi.edu.au", role = c("aut", "cre"), 
           comment = c(ORCID = "0009-0001-6242-4269")),
    person("Stefano", "Mangiola", email = "mangiolastefano@gmail.com", role = "aut")
  )
Description: tidySpatialExperiment provides a bridge between the
        SpatialExperiment package and the tidyverse ecosystem. It
        creates an invisible layer that allows you to interact with a
        SpatialExperiment object as if it were a tibble; enabling the
        use of functions from dplyr, tidyr, ggplot2 and plotly. But,
        underneath, your data remains a SpatialExperiment object.
License: GPL (>= 3)
Depends: R (>= 4.3.0), SpatialExperiment, tidySingleCellExperiment,
        ttservice
Imports: SummarizedExperiment, SingleCellExperiment, BiocGenerics,
        S4Vectors, methods, utils, pkgconfig, tibble, dplyr, tidyr,
        ggplot2 (>= 4.0.0), plotly, rlang, purrr, stringr, vctrs,
        tidyselect, pillar, cli, fansi, lifecycle, magick, tidygate (>=
        1.0.13), shiny
Suggests: BiocStyle, testthat, knitr, markdown, scater, igraph,
        cowplot, DropletUtils, tidySummarizedExperiment
VignetteBuilder: knitr
Biarch: true
biocViews: Infrastructure, RNASeq, GeneExpression, Sequencing, Spatial,
        Transcriptomics, SingleCell
Encoding: UTF-8
RoxygenNote: 7.3.3
Roxygen: list(markdown = TRUE)
URL: https://github.com/william-hutchison/tidySpatialExperiment,
        https://william-hutchison.github.io/tidySpatialExperiment/
BugReports: https://github.com/william-hutchison/tidySpatialExperiment/issues
LazyData: true
Config/pak/sysreqs: cmake make libmagick++-dev gsfonts libicu-dev
        libuv1-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 13:02:14 UTC
RemoteUrl: https://github.com/bioc/tidySpatialExperiment
RemoteRef: HEAD
RemoteSha: 67d77f3ade02a246323b924100a636b1f6e7bd85
NeedsCompilation: no
Packaged: 2026-05-30 09:43:47 UTC; root
Author: William Hutchison [aut, cre] (ORCID:
    <https://orcid.org/0009-0001-6242-4269>),
  Stefano Mangiola [aut]
Maintainer: William Hutchison <hutchison.w@wehi.edu.au>
Built: R 4.6.0; ; 2026-05-30 10:12:37 UTC; windows
