Package: rcellminer
Type: Package
Title: rcellminer: Molecular Profiles, Drug Response, and Chemical
        Structures for the NCI-60 Cell Lines
Version: 2.35.0
Date: 2025-04-11
Author: Augustin Luna, Vinodh Rajapakse, Fabricio Sousa
Maintainer: Augustin Luna <augustin.luna@nih.gov>, Vinodh Rajapakse
 <vinodh.rajapakse@nih.gov>, Fathi Elloumi
 <fathi.elloumi@nih.gov>
Description: The NCI-60 cancer cell line panel has been used over the
        course of several decades as an anti-cancer drug screen. This
        panel was developed as part of the Developmental Therapeutics
        Program (DTP, http://dtp.nci.nih.gov/) of the U.S. National
        Cancer Institute (NCI). Thousands of compounds have been tested
        on the NCI-60, which have been extensively characterized by
        many platforms for gene and protein expression, copy number,
        mutation, and others (Reinhold, et al., 2012). The purpose of
        the CellMiner project (http://discover.nci.nih.gov/ cellminer)
        has been to integrate data from multiple platforms used to
        analyze the NCI-60 and to provide a powerful suite of tools for
        exploration of NCI-60 data.
License: LGPL-3 + file LICENSE
LazyData: true
Imports: stringr, gplots, ggplot2, methods, stats, utils, shiny
Depends: R (>= 3.2), Biobase, rcellminerData (>= 2.0.0)
Suggests: knitr, RColorBrewer, sqldf, BiocGenerics, testthat,
        BiocStyle, jsonlite, heatmaply, glmnet, foreach, doSNOW,
        parallel, rmarkdown
URL: http://discover.nci.nih.gov/cellminer/
VignetteBuilder: knitr
biocViews: aCGH, CellBasedAssays, CopyNumberVariation, GeneExpression,
        Pharmacogenomics, Pharmacogenetics, miRNA, Cheminformatics,
        Visualization, Software, SystemsBiology
RoxygenNote: 7.1.1
Encoding: UTF-8
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:40:55 UTC
RemoteUrl: https://github.com/bioc/rcellminer
RemoteRef: HEAD
RemoteSha: 78d9626cf02b05f371b181dbf06fa3d07d479e49
NeedsCompilation: no
Packaged: 2026-05-30 07:03:58 UTC; root
Built: R 4.6.0; ; 2026-05-30 07:06:10 UTC; windows
