Package: piano
Type: Package
Title: Platform for integrative analysis of omics data
Version: 2.29.0
Date: 2022-09-13
Author@R: c(person("Leif", "Varemo Wigge", email =
        "piano.rpkg@gmail.com", role = "aut"), person("Intawat",
        "Nookaew", email = "piano.rpkg@gmail.com", role = "aut"))
Author: Leif Varemo Wigge <piano.rpkg@gmail.com> and Intawat Nookaew
        <piano.rpkg@gmail.com>
Maintainer: Leif Varemo Wigge <piano.rpkg@gmail.com>
Depends: R (>= 3.5)
Imports: BiocGenerics, Biobase, gplots, igraph, relations, marray,
        fgsea, shiny, DT, htmlwidgets, shinyjs, shinydashboard,
        visNetwork, scales, grDevices, graphics, stats, utils, methods
Suggests: yeast2.db, rsbml, plotrix, limma, affy, plier, affyPLM,
        gtools, biomaRt, snowfall, AnnotationDbi, knitr, rmarkdown,
        BiocStyle
Description: Piano performs gene set analysis using various statistical
        methods, from different gene level statistics and a wide range
        of gene-set collections. Furthermore, the Piano package
        contains functions for combining the results of multiple runs
        of gene set analyses.
License: GPL (>=2)
biocViews: Microarray, Preprocessing, QualityControl,
        DifferentialExpression, Visualization, GeneExpression,
        GeneSetEnrichment, Pathways
URL: http://www.sysbio.se/piano
BugReports: https://github.com/varemo/piano/issues
VignetteBuilder: knitr
RoxygenNote: 7.1.2
Config/pak/sysreqs: cmake libglpk-dev make libuv1-dev libxml2-dev
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:37:38 UTC
RemoteUrl: https://github.com/bioc/piano
RemoteRef: HEAD
RemoteSha: bccb63e8da38aa9ce291695c777cd6636936b7a1
NeedsCompilation: no
Packaged: 2026-05-30 07:14:46 UTC; root
Built: R 4.6.0; ; 2026-05-30 07:17:18 UTC; windows
