# `orthos` is an R package for variance decomposition using conditional variational auto-encoders

## Documentation for package ‘orthos’ version 1.11.1

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

orthos-package | orthos - variance decomposition using conditional variational auto-encoders
decomposeVar | Decompose input contrasts to decoded and residual fractions
loadContrastDatabase | Load contrast database
orthos | orthos - variance decomposition using conditional variational auto-encoders
plotQueryResultsManh | Visualize query results as a composite manhattan/density plot.
plotQueryResultsViolin | Visualize query results as violin plots
queryWithContrasts | Query the contrast database with a set of contrasts
testOrthosEnv | Test conda environment